Hemiscyllium ocellatum (epaulette shark): 132827385
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Entry
132827385 CDS
T09720
Name
(RefSeq) serine/arginine-rich splicing factor 1B-like
KO
K21123
serine/arginine-rich splicing factor 9
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03040
Spliceosome
hoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132827385
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132827385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hoc03041
]
132827385
Spliceosome [BR:
hoc03041
]
Common components
Common spliceosomal components
SR proteins
132827385
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
132827385
NCBI-ProteinID:
XP_060700031
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All DBs
Position
24:44856179..44883746
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AA seq
225 aa
AA seq
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MSANYRWGGPSSGESRIYVGNLPTDVRIRDIEDIFYKYGKIRDIDLKNKRGSPPFAFVEF
EDPRDAQDAVYGRNGYDYGVYRLRVEFQRGRGIGGVGGGSRGRPGPAARRSDFRVIVSGL
PPSGSWQDLKDHMREAGDVCYADVLGEGAGVVEFLRKEDMDYAVRKLDDTKFRSHEGETA
YIRVRADKPRSSSYGRSRSRSLSRGRYSPYQSRSSPRYSPRPQYR
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaactaccggtggggaggccccagtagcggcgagagccgtatctacgttggg
aacctgccgaccgacgtgcggatccgcgatatcgaagatatcttctacaagtacgggaaa
attcgagacatcgacctgaagaataaacgcggctccccgccattcgccttcgtggagttc
gaggatccgagagatgcacaagacgcagtctatggaagaaatggttatgattatggagtc
tatcgtttacgtgtggaattccagagagggagaggaattggcggagtcggcggtggatct
agaggaagaccaggaccagctgcccgcagatcagatttcagggtcattgtctctggactt
cctccctctggcagttggcaggatttgaaggatcacatgcgagaggctggtgatgtttgc
tatgcagatgttctgggtgaaggtgctggagtggtggaattcctccgtaaggaggacatg
gattacgcagtgcggaagcttgatgatacaaaatttcgctctcatgagggagaaactgct
tatattagagttcgtgcagacaagcccagaagttctagttacggcaggtcaagatcaagg
tccctttctagaggtcgttattctccttatcaaagtaggagctcccctcggtattcaccg
agaccccaatatagatga
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