Hemiscyllium ocellatum (epaulette shark): 132827426
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Entry
132827426 CDS
T09720
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03082
ATP-dependent chromatin remodeling
hoc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132827426
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132827426
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hoc01009
]
132827426
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132827426
03036 Chromosome and associated proteins [BR:
hoc03036
]
132827426
Protein phosphatases and associated proteins [BR:
hoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132827426
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132827426
SWI/SNF complex
132827426
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132827426
PBAF complex
132827426
SWI/SNF complex
132827426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
132827426
NCBI-ProteinID:
XP_060700097
LinkDB
All DBs
Position
24:complement(57978755..58016369)
Genome browser
AA seq
373 aa
AA seq
DB search
MAASKTFGQKPVKFQLEEAGEWYMIGSEVGNYLRMFRGSLYKRYPSLCRRLATVEERKKI
VASSHDHGYTTLATSVTLLKAAEVEEILEGNDEKYKAISISTEPPAYLREPKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRNRMSRDKKRTFPLCFDDHDPAVIHENASQAEVLVPIRLD
MEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASAIRQQIDSYPTDS
ILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPAW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagtaaaacgttcggccagaagccggtgaaattccagctggaggaggcggga
gagtggtacatgatcggctcagaggttggtaactacttgcgcatgttcaggggttccctg
tacaaaagatacccatctctgtgtcgccgactagctacagttgaagaaagaaagaagatt
gtggcatcctcacatgatcatggttataccactttagctaccagcgtgacgcttcttaaa
gctgcggaggtggaggaaatcctagagggaaatgatgagaagtacaaagccatctcgatc
agcactgaaccacctgcctatctcagagagccgaaagcgaagcgcaatagtcagtgggtg
cctaccctgcccaacagctcccaccacttggatgctgtgccctgttctacaaccataaac
cgcaaccgtatgagccgggacaagaaaaggacattcccactctgctttgatgaccatgac
ccagcagtaatccatgaaaatgcatctcaggcagaggtgctggttcctattcgcctcgac
atggagatagacggacagaagctgagggatgctttcacatggaacatgaatgaaaagttg
atgacaccagagatgtttgcagagattttgtgtgatgacctcgatttgaatcctttgacc
tttgtccctgccattgcatcagcgatacgccaacagattgactcctacccaacagatagt
attctagaggatcagtctgatcagagagtcatcattaagctgaacatccatgtgggaaac
atctcgctggtcgatcagtttgagtgggacatgtctgagagggagaactctcctgagaaa
tttgctctgaagctgtgttccgagttgggtcttggaggggagtttgttaccaccatcgct
tacagtatccggggtcagcttagctggcatcagcgcacatacgccttcagtgagaaccct
ctacccacagttgagattgcaatcaggaatacgggcgatgctgaccagtggtgcccccta
ctagaaacactgactgatgctgaaatggagaagaagattcgagatcaggatagaaacaca
aggcgcatgagacgtcttgcaaacacagctccagcttggtaa
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