Hemiscyllium ocellatum (epaulette shark): 132827918
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Entry
132827918 CDS
T09720
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132827918 (helz)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
132827918 (helz)
3'-5' decay
Other 3'-5' decay factors
132827918 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
UvrD-helicase
AAA_30
zf-CCCH
ResIII
PAM2
PhoH
Mov-10_helical
zf_CCCH_4
AAA_22
AAA_16
AAA_7
AAA_5
zf-CCCH_4
Helicase_RecD
MOV-10_Ig-like
Motif
Other DBs
NCBI-GeneID:
132827918
NCBI-ProteinID:
XP_060700716
LinkDB
All DBs
Position
25:complement(8196653..8490231)
Genome browser
AA seq
1910 aa
AA seq
DB search
MAYRRPDKSCEQAFEYLRVQEYELAAKYCTEALITLSNPSITTASCQPELDRIRIETLLY
RIACFLQLKNYDQADGDCKIVLAERLAKGDGTLQAVFRCMYVEGKLQAVSSILSKSLMGE
SLNGMITKDVTRLKMLLEEMEITSNKLMSTYLEGTEEDSEDGWQFRPPPRGVTCSEEYTL
CKRFIEQKICRYGAQCTSAHSQKELTEWQKRYSSRLMRLKQQKENKQSIGNYMETLIEKW
MNSLSPEKVLSEFVDGVTVEHSPELSITVTTKKSSQAWTFVLHCKPARLLYRIALLYDAH
RPHFSIMTVSVGDLNTQVVQDVPENCQEWLGGGKMTQNGMDHCIYRVSVQFNTEIFGTFR
QTVVFDFGSEPVLMQRIMVDAASIEDLEHLMQARQQLLTTAKRWDSTCKTIVEFEPNETT
DLEKSLLTRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEVSKFNIKV
NLYLVANFMLTGVSGGAKYAQGGQLFARFKLTETLSEETLAGRLVMTKVNSVLLLPITKE
RSMQAQGTKEKVYEAMIEEKTKECIYLRLTKDCCEELKLRADREMQVELQFQLNRLPLCE
MHYALDRIKDNSILFPDVCMFPTIPWSPISRQWDEQLDPRLNTKQKEAILAITTPLSIPL
PPVLIIGPYGTGKTFTLAQAVKHILKQQDTRILICTHSNSAADLYIKDYLHPYVEAGNPQ
ARPLRVYFRNRWVKTVHPIVQQYCLISSTHSTFQMPQKEDILRHRVVVVTLSTSQYLCQL
DLELAGLFTHILLDEAAQAMECETIMPLALASRHTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNSEVFEIVERVEELRRKWPVAWGKLDEGSIGVVTPYADQV
FRIRSELRKKRLSEVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLVEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWESFIDICHENNSLHGI
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQQPANPNKQQQQQPSPPKNKGHHHNQ
GDHFPTDGFVQPNPTVLIGNPIRAYTPPLGPHPSLGKSPSPVQRIDPHTGTSILYVPAVY
GGNMVMSVPLPVSWPGYQGRFAVDPRIMSHQAAMAYNMNLLQAHGRGSPIPYNLGHHSPI
GPGQQHSEKDHEQNRAAKCEGSVRTEQNRLQTPEKKLPDSKEKQVEPELLAQNRSPEVHP
NLGYPISRFHRKDNLSQRQLNFHLASSHPPPAPYHHSSNRQFLHQPPVPKQSYPVQQHQL
PQQHNQMPQQQPSQLSPAFPQAPNHTYFPTSHSHPSPHSPNNDNVCPDQSLSGLEGLNPL
RSVPHFNNPHARPFNFVENNTSGHGMGEILDSLHTNTAEDLIRQHSRIHPWNEHQDYVNT
GCPSYPHQVQQFTHPSQQQVRYSQHALKGQWKQGNNPEEEKGPTYQRFPGLLRETPTSDQ
TENKELNEMPLQSRLLQYRQIQTRNPPVHLPTANANHNSQYTNLNDSNSSLEPINNSGFQ
QLPQQPVYNPAYPIRSGHTPPPSSKYLQPEGSWTLPGVQQNHMLGQSIPYGISQLPHRSE
SHPIMSVQHQHNSREDSFHPISSQTASVSSLHSIEKYEARGPGRPLYQRRISAGSVQAFP
EDSSNPQGNLNQCKELQDHSNHPSYNYTSPEMWVNANSSAAFQNILCNGSNRAVAPRDLL
VQSKKLRTPEEHLKPENVSQLSANSFNYNVLQHLGQFPPLLSNSQITESSSQQKASGNKP
VMSYANALRAPPKPKPPPEPAKKNGDPLSLFQELSIGSSSGSNGYYSYFK
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggcatataggagaccggataagtcatgtgaacaagcatttgaatacctgagagtgcaa
gaatatgagctggcagccaagtactgtacagaagcactcattacccttagcaatccttcc
attaccactgcatcatgccagccggagctagatcgtattcgaattgaaactcttctttac
aggatagcctgcttcttgcaacttaaaaactatgaccaggctgatggagactgtaaaatt
gtgttggcagagagactggccaagggagacggcacactgcaagcagtgtttcgctgcatg
tacgtggaggggaagttacaagcagtgtccagcattttatcaaaatccttgatgggggaa
tctttgaatgggatgataacaaaagatgtaaccaggctcaaaatgcttcttgaagaaatg
gagataaccagcaataaactgatgtccacatatttggaaggcacagaagaagattctgaa
gatggatggcagtttcggcctcctccccgaggtgtcacctgtagtgaagagtacacatta
tgtaaaaggtttatagagcagaaaatatgtagatatggtgctcaatgtacatctgcacac
tcgcagaaagagttgacagaatggcagaaacgttactcttcacggctgatgcgcttgaaa
cagcagaaagaaaataaacaatctattgggaattatatggaaacgttaattgaaaaatgg
atgaattctttatctccagaaaaagtgcttagcgagtttgtggatggagtaacagtggaa
catagcccagaattgtcaataacggtgacaaccaagaaatctagtcaagcatggaccttt
gtactccattgtaagcctgcacgtttgctgtatcgaatagctttgctctacgatgctcat
cgtcctcatttttctattatgactgtctctgttggtgatctcaacacccaggtggtacaa
gatgtacctgagaactgtcaggagtggcttggaggagggaagatgactcagaatggaatg
gaccattgtatctatagagtcagtgtacaattcaatacagaaatatttggaacttttcgt
caaactgtagtttttgactttggatctgagccagtcctgatgcaaaggattatggtggat
gctgcttcaatagaagatttagaacacctgatgcaagcaaggcagcaacttctcaccaca
gctaaacgatgggattccacttgtaaaacaattgtagagtttgagccaaatgaaactact
gacttggagaaaagtctcttgacccggtaccagattccgttgtctgcagaccagctcttc
acacaatctgtgcttgacaaatcattgaccaaatctaattatcagtctcgattacatgat
ttactgtacattgaggaaatagcacagtataaagaagtcagcaagttcaacattaaagta
aatttatatctggtagcaaacttcatgcttactggtgtttcaggcggtgctaaatatgct
caaggaggacaactttttgctcgcttcaaactcactgagactctttcggaagaaacattg
gctggacgattggtaatgaccaaagtcaattctgtcctgttgttgccaataactaaggag
aggtccatgcaagcccagggaaccaaagaaaaggtttacgaagccatgattgaggaaaaa
actaaagaatgcatttacttaaggttgaccaaggattgctgtgaggagctaaaacttcga
gcagacagagaaatgcaggttgaacttcaatttcaactcaatcgcttgcctctctgcgaa
atgcattatgctctggacagaatcaaggacaacagtattctctttccagatgtctgcatg
tttcctacaattccctggagtcccatcagtagacaatgggatgagcagttggatccccgg
ctaaatactaaacagaaggaggctattctggcaatcacaactccactttccatcccactt
cctccagttctcatcatcggtccctatggaacaggaaaaacatttacactggctcaggca
gtcaaacacatactgaaacagcaggatacaagaatccttatttgcacccactctaacagt
gctgctgatttatatataaaagattatctccatccttacgtagaagctggaaatccacag
gctcggcctctcagggtatatttcagaaatcgatgggtgaagactgtgcatccaatagtg
caacaatactgtttgatttcaagcactcattccacctttcaaatgccacagaaagaggat
atcttgagacatcgagtggtggtggttactcttagtacatcgcaatatctctgtcagttg
gaccttgaattagcaggtttattcactcatattctgttggatgaagctgctcaagcaatg
gagtgtgagaccatcatgcctttggcactagcaagtagacacacaaggattgtcttagcc
ggtgatcacatgcagcttagtccgtttgtatacagtgaatttgcccgggaaagaaatctt
catgtatcgttgctagatcgtctgtatgaacactatcctgcagagtttccatgcagaatt
ctactatgtgagaactatcgttcccatgaagctattatcaactacacttctgaactattc
tatgagggtaagttgatggcgagtggaaagcaaccagcacataaagatttctatccacta
acattcttcacagcccgaggagaggatgtgcaagagaaaaacagcactgctttctataac
aattcagaggtttttgaaattgtggaacgtgttgaagaactcagaaggaaatggccagtt
gcctgggggaaattggatgaaggcagcattggagtagtaacaccatatgctgatcaagtg
tttaggattcgatcagaacttcgtaagaagagattgtcagaagtgaacgtagagagagtt
ttgaatgttcaaggcaagcagtttagagtcttatttctcagtacagtaaggacaaggcat
acatgcaaacataagcaaacccccatcaagcgaaaggaacaattggtagaggactccacc
gaggacctggactatgggtttctttctaattacaagctacttaatactgccatcactcgg
gcacagtccctggttgctgtggttggagaccctatagctctatgctcagttgggagatgc
aggaaattctgggaaagcttcattgatatctgtcacgagaacaacagtctccatggcatc
acatttgagcaaatcaaggcacagctggaggcacttgagttgaagaagacatatgtcctt
aatccgctggctccagaattcatcccgagagctctccgacttcagcagccagcaaatcct
aacaaacaacaacagcagcagccatctccacctaagaataaaggccaccaccacaatcag
ggcgaccactttccaacagatggatttgttcaacctaatcctacagtattaattgggaat
cccatcagagcatatactccacctcttggtcctcatccttcccttggtaaatctccaagc
cctgtccaacggatagatcctcataccggtactagcatcctttatgtgcctgctgtctat
ggtggaaacatggtgatgtctgtgcctttgccagtttcgtggcctggttaccaaggccgt
ttcgcagttgatcctcgcattatgagccatcaagcagcaatggcatacaacatgaacttg
ttgcaagcacatggacgtggatctcccatcccctacaatttaggtcatcattccccaatt
ggaccagggcagcaacactcggagaaggatcacgaacaaaacagagctgcaaaatgtgag
ggtagtgtgagaactgaacaaaacaggcttcaaactcctgagaagaaactgcctgattca
aaggagaagcaggtagaacctgaattgctggcacagaacagaagccctgaagtgcacccc
aacttaggctatcccatttctagatttcaccgtaaggacaatctcagtcaaaggcagctg
aatttccatctagcttcttcacatccaccacctgcaccttaccatcactcatctaatcga
cagttccttcatcagccccctgtaccgaagcaatcatatccagtgcaacaacatcaactg
ccccagcaacacaaccaaatgccacagcaacagccatcacagctttctcctgcttttcca
caagctcctaaccacacctattttcctacttcccattctcatccatctccgcattcccca
aacaatgataacgtgtgtccggatcagtctctctctggactagaaggactaaacccgctg
aggtcagttccacacttcaacaacccccatgctcgtccatttaatttcgtcgaaaacaat
acctcaggacacgggatgggggaaattttagattcattacacaccaacacagctgaagat
ctcataagacagcattcaagaattcacccatggaatgagcatcaggactatgtcaataca
gggtgtccatcatatcctcaccaagttcagcagttcacacacccatcccagcaacaagtc
aggtattcacaacatgctctcaaagggcagtggaaacaaggcaataatcctgaagaggaa
aaagggccaacatatcaaagattcccaggtttattaagagagacaccaacttcagatcag
actgaaaataaagaactgaatgagatgcctttgcagtcccgtttgttacaataccgacaa
attcagaccagaaatccccctgtacatcttcctacagctaatgcaaatcacaacagccaa
tataccaatttgaatgacagtaattcctcccttgaacctatcaacaactctggctttcag
caactgcctcaacagccagtgtacaatccagcatatccaatacgttcaggacacacacca
ccaccttcttcaaaatacctgcagcccgagggatcatggacgcttcctggcgtgcaacag
aaccacatgctagggcaaagtataccgtatggcatttcacagttgcctcacagatcagaa
tcgcatcccataatgtctgtacagcaccaacataacagtagagaggactcgtttcaccca
atctcttctcaaacagcatctgtttcttcgcttcacagcatagaaaagtatgaagccaga
ggaccaggaaggcctttgtaccaaagaagaatttcagccggttctgttcaagcatttcct
gaagattctagtaatcctcaaggcaatcttaatcaatgtaaggagcttcaagatcacagc
aaccatccgtcatacaactatacatctccagagatgtgggtgaatgctaattcttcagcc
gccttccagaatattctctgcaatggttccaacagagcagtggcaccacgggacctttta
gttcaatccaagaaactaagaaccccagaagagcacctaaagccagagaatgtatcgcag
ctgtcagcaaactcgttcaactacaatgtgctccagcaccttggccagtttcccccactc
ctgtccaacagccagatcacagagtccagcagccagcagaaagcaagtggaaacaaacca
gtcatgtcgtatgccaatgcattacgggctccaccaaagcctaaacctccacctgagcct
gcaaagaaaaatggcgaccccctgtctttgtttcaggaacttagcataggcagttcatca
ggtagcaatggatattactcttatttcaaataa
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