Hemiscyllium ocellatum (epaulette shark): 132828034
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Entry
132828034 CDS
T09720
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132828034 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoc02000
]
132828034 (abca5)
Transporters [BR:
hoc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
132828034 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_29
Rad17
IstB_IS21
AAA_22
DUF87
AAA_23
DUF7139
Motif
Other DBs
NCBI-GeneID:
132828034
NCBI-ProteinID:
XP_060700922
LinkDB
All DBs
Position
25:26230875..26334621
Genome browser
AA seq
1665 aa
AA seq
DB search
MGGLNRKDAAIWQQTKALLYRNFLIKKRNKDQTLQELLLPLFLVFALVCLSVLVPPQLYL
KTLTSEPEELDNFVQLDYRLGYTPVNNHTKEIMAEVGALLEMAPYGFKDEQAMEQACCSH
TSRPLLGVSFINSFSYQLRYPYNKVPRTNERIDFIDEKASCRLDSASLSQLKDCPGALYL
LSGFATIQKHIDVAIIKTQTNYSVWKDIMPLHIRMMGLPSHVGADIFSHFVTSLYFVIAF
VPFVNFLLINLVTEKKEVKDVMKVMGLYDSAFWLSWGLLYMVLIFILSLLMAVIATQTSL
FPRSSILIVFPLLFLFGISIIPFSFLLTPLFKNQKIAGLVGSLMLMGFGLFSLPTILVRD
FPVSAVWGLCVFSPSALAIGIAQVVLLEAIGDGAQPSNLSASPFPLYIPLFMLVLDSFLY
LLIAVYLDQVLPGEFGQRQPFFYFLKPSYWFHKQKHYVNIDSISENEFGLGPVFNEVVEA
VPAELKGKEAIRLKGVHKLYKGKEKKVEALKGLSFDIYQDQITALLGHSGTGKTTLISIL
SGLCPLSDGCATVYGYRVSELDEIIQIRKMMGVCPQFDVLFYSLTVKEHLKILAMIKGIT
AQEIDKEVLNVIKELDMETIMDVRAEKLSGGQKRKLSMGMAILGDPKVLLLDEPTAGMDP
CSRQQVWALLKKRKIGRVILLTTHFIDEADILADRKAVISQGQLKCVGSSLFLKSKFGVG
YNLRMSVNESCYPDKVTSLVKYHIPNAEFSQLHELDLAYTLPLQDVNKFAGLFEDLDSRP
NLGIDSYGVSMTSLDEVFLKLEEESEIDQADYSVFTKDPAPDVIANEEDICIDCIDHQLL
TFPETNSAMLTGIALWQHQFRTIAWLRLMNFSRERSALLYIIYIIGLLISIVVMMALLNG
TLSRKDVSVELSPELILLHQGQNPQKYTTSLLLKNSTGSNIDKLVHAFEAQSVKVEMFND
SEFTDVAPHNAALNVSLSEEKQYMFTAVFNSTVIHSLPVLINMISNALLISVNGSGGIHT
WSKPFHLTITDADFKEKVYMALAVLGLLSAALPGCYTMDNSRDREIKSRSQLRLSGLFPS
AYWCGYALVDIPVYFGIVVVMLGCVIAFNSTSLLHTGAVISMMLCLIGWAPAMTLFSYAY
SFRFDRMQTSRDFFLISSVIINIISISLIFLVRLILKETAANMLHGALSLFIPPYVITGC
LYYTAKVFLDHKDEPSLTVGTYLEWKQNILITIISPYIQCIILLFVLRQLEKIHGGKAIQ
ADKCCRIFPSKSKFKINTEEPDNEDDDVKEERARVREALTCQSCEEKPVIVVSNLRKVYT
GKPQVCKCFSKQKNKNVVATKNVSFCVRKGEVLGLLGPNGAGKSTTISVLTGDLEPSAGQ
VLMGDYSTEYLQRESSVESIGYCAQVNPLWPKLTVQEHLEIYAAIKGLSREDAANAIKRI
VKALELKEYLQKSTKKVSSGIKRKLCFALCMLGNPQIVLLDEPSTGMDPKSKQFMWRAIR
AAFKDRQRGAILTTHYMEEAEALCDRVAIMVSGQLRCIGSIQHLKSKYGGGYTLEIKLKG
EMTEAQQISIIHDKIMQIFPQASRQESFVAMLTYKIPKNDVESLSKAFSKLEEAKHSFDI
EEYSFSQSTLEQVFMQFAKEQENNEEDYKTLDTSFRWQQLQQNEC
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtttgaacagaaaagacgctgcgatttggcagcaaaccaaagcacttttatac
agaaattttctcataaaaaagcggaacaaagatcagactttacaggaattgcttttaccg
ctctttttagtttttgctttggtttgcttaagtgtgcttgtccctccacaactgtacttg
aagacactcaccagtgagcccgaggagctggataattttgtacaacttgactacagactt
ggttatacaccagtgaacaatcacaccaaggaaatcatggcggaagtaggggcactgctt
gaaatggcaccttatggattcaaagatgaacaagcaatggaacaagcttgctgttcacat
acctctagaccattgttgggagtttcgttcatcaattctttctcttaccaacttcggtat
ccctataataaagttccacgtaccaatgaaaggattgacttcatcgatgagaaagcaagt
tgccgtttggattctgcctccttaagtcaactgaaggactgtcctggtgcattgtacctg
ttatcaggatttgcaacaatacaaaaacatatcgatgttgccatcattaagacacaaacc
aattattctgtctggaaggatattatgcctctacacatacgaatgatgggcttaccaagt
catgttggtgcagatatcttttcacattttgtcacttctctctattttgttattgctttc
gtgccttttgtcaattttctgctaatcaaccttgtaacagaaaaaaaggaagtgaaagat
gtgatgaaggtgatgggactttatgactctgctttctggctttcgtggggtttgctctac
atggttttaattttcattctgtccttgctgatggccgtcattgccactcagacatctctg
tttccaagaagcagcatattgattgtctttccattgctattcttgtttgggatttccata
attcccttttcatttttgttgactccgctttttaagaatcagaagattgctggtttggtt
ggatccttaatgctcatgggctttggattgtttagccttcctacaatcctggtcagagac
tttccagtgtctgctgtgtggggactatgtgtattttcccctagtgccttagccattgga
attgcacaggttgtgcttcttgaagctattggtgatggtgctcagccctcaaatctgtca
gcaagcccattccctttatacatacctcttttcatgttagtcctcgacagtttcctatat
ctgcttattgctgtataccttgaccaagttctcccaggtgaatttgggcaacgtcaacct
tttttctacttccttaaaccctcgtactggttccataaacaaaaacattatgttaacatt
gattcaattagtgaaaatgagtttggccttggacctgtgtttaatgaggtggtggaagca
gtgcctgcagaacttaaaggaaaagaagcaatcaggttaaaaggtgttcacaagttatat
aaaggaaaagagaaaaaagtggaagcactgaaaggtttgtcatttgatatttatcaagat
cagatcacagcactactgggtcacagcggaactgggaaaacaacattaattagcattctt
tctggactgtgtcctctgtcagatggttgtgcaacagtttatggatacagagtttctgaa
ttggatgaaataattcagatcagaaagatgatgggggtttgtccacagtttgatgtccta
ttttacagtcttacagtaaaggaacatttaaaaattcttgctatgataaaaggaattaca
gcacaggaaattgataaagaggtgctgaatgtcataaaagaactggatatggaaacaatt
atggatgtccgtgcagaaaaactcagtggtggacaaaaaaggaaactttcaatggggatg
gcaattttgggagatcctaaggttttactacttgatgaaccaactgctgggatggatcct
tgttcacgacagcaggtgtgggcattgctgaaaaagcgcaaaataggaagggtcatactg
ttgactactcacttcatagatgaagctgatattctggcagatcgtaaagctgtcatctca
caagggcagctcaaatgtgttggctcctcgctgttcctgaaatcaaaatttggtgtgggc
tataacctcagaatgtctgtgaatgagtcttgctaccctgataaagtgacatcattggtc
aaatatcatataccaaatgctgaattttcacaattgcatgagctggatctggcatatact
ttacctcttcaggatgttaacaaatttgcaggtctatttgaagatttggacagccgtccc
aatcttggaattgacagctatggtgtttccatgacatccttggatgaggttttcttaaaa
ttggaggaagaatcagaaatagatcaagcagattatagcgtttttaccaaggatccagca
ccggatgtaatagcaaatgaagaagacatttgcattgactgcattgatcaccagctactg
actttcccagaaactaactcggcaatgttgactggcattgctctgtggcaacaccaattt
cgcaccatagcatggttgcgtttgatgaatttcagtcgagaacgcagtgcactcctttat
atcatttacataatcggccttttgatatccattgtggttatgatggctttattaaatggt
actcttagtcgaaaggatgtttcagtggaactatcccctgagttaattctactccatcaa
ggacaaaacccccaaaaatataccactagtcttcttctgaaaaattctacaggcagtaat
attgataaacttgtccacgcttttgaagcacagagcgtgaaagtggagatgttcaatgat
agtgaattcacggatgttgctccacacaatgcagcactaaatgtgtcactttcagaagag
aaacagtacatgttcacagcagtgttcaacagcacagtgattcactcactgccggtgtta
atcaacatgatcagtaatgccctcctcattagcgtaaatggttccggtggaattcacacg
tggagcaaaccattccacttaacaatcacagatgctgactttaaggaaaaggtttatatg
gctttggcagttttggggttgttatcagctgccttgccaggatgctacaccatggataat
tcacgagatcgtgagattaaatctcgctctcaacttcggctttctggcctctttccttct
gcatactggtgtggttatgctttggtggatatcccagtttattttggcatagttgtagtc
atgcttggctgtgtgattgcatttaattccacatctttgcttcatactggtgctgtaatt
tcaatgatgctgtgtcttattggctgggccccagcaatgacactgttctcctatgcctat
tccttcagatttgatcgaatgcagacttctcgggacttttttctgatctcttcagttatt
atcaatataatttcaatcagtctcatatttttggtccggttaatactaaaggaaacagct
gccaatatgctgcatggcgctttgtcactttttattccaccatatgtgattacaggatgc
ttgtattacacagccaaggtttttctggatcacaaggatgaacccagtctaacagtgggg
acatatctggaatggaaacagaacatccttataactataatctcaccctacattcaatgc
ataattttgctgtttgtactacgccaactagaaaagattcatggaggaaaagcaattcaa
gcggataaatgttgcagaatctttccctcaaagagcaaattcaaaataaatacagaagaa
cctgataatgaggatgatgatgtcaaagaagaaagggcaagggttcgggaagcattgaca
tgtcagagctgcgaggagaaaccggtgattgtggtcagtaacttgcgtaaagtttacact
gggaaaccgcaggtctgcaagtgtttttcaaagcaaaaaaataaaaatgtagtggcaact
aaaaatgtctccttttgtgtaagaaaaggtgaagttctgggattattgggcccaaatggt
gctggaaaaagcactactatttctgtgctcacaggcgacttggaaccatcagctggccag
gtattgatgggggattactcaactgaatatttgcaaagagaaagctctgtagaaagtata
ggttattgtgcacaggtgaacccactctggcctaagcttactgtgcaggaacatctggag
atatatgctgccatcaagggactcagtagagaagatgcagcaaatgctattaaacgcatt
gtaaaagctcttgaactgaaggaatatctccagaaatcaacaaagaaagtctccagtggg
ataaagaggaaactttgctttgcactatgcatgttggggaatcctcagattgtattactg
gatgagccatcaacgggcatggatcctaaatccaaacagtttatgtggagagcaattcgg
gctgcattcaaggatagacaacgtggtgccatcctgacaacacattatatggaggaagct
gaagcactttgtgatcgtgttgctatcatggtgtcaggacagttaaggtgtattggctcc
atacagcacctaaagagcaagtatggtggaggatatacgctggagattaaactgaagggt
gagatgacagaagcacaacaaatatctatcattcatgataaaataatgcaaatatttcca
caagcttctcgccaggaaagttttgttgcaatgttgacatacaaaattcccaagaatgat
gttgagtctttgtcaaaggcattttccaagcttgaagaagccaaacacagttttgatata
gaagaatatagtttctcgcagtccacactggaacaggttttcatgcagtttgctaaagaa
caagaaaataatgaagaggattataaaaccttggatacaagctttcgatggcagcagctt
caacaaaatgaatgttaa
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