Hemiscyllium ocellatum (epaulette shark): 132828368
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Entry
132828368 CDS
T09720
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03015
mRNA surveillance pathway
hoc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132828368
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132828368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132828368
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
132828368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
132828368
NCBI-ProteinID:
XP_060701389
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All DBs
Position
26:complement(17952629..17991132)
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AA seq
677 aa
AA seq
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MAVHSNLSGPSLPQLSDTNKTEGESSAQQLENENRVQMDLYDDLIGDIIGVPLKKEVEPK
KDNLECTSNNILIPIKADPSKSCDPEYIDAPLHKKLMLIGNLTWWTTSDDLLAAIHSAGI
SSVDDMKFYEVAKGGQSKGFASVTLSLKSDIQRLLKILPKKEVHGRNLDVRHFTKANYQY
FETQFINAMEKSKLHSAHCDIFGCNGNDNQFVFDPVEEGYPDPIPWQIQQKFSTFINLRS
LTKDPVVPDKTFPPFPHPQIRQITSVVETKLHHGSTPFSNNMLLQNLTSLAVPPVSISAA
NIPSPVVGAFPQFFFKYLTSLGIPLTNIPAPLLSTFPRFFLQSLPSSPVSPVNVPIPVLS
GHGLSQISQTSCVNPATFITPTIMGLSTLDNNKTPPVYNTYHKDYKLSGRETGVQETLQS
IEEPIKELDSKGTFSTNDDGNNDYGNLLQLVSFVKKSKAIAPDSFRDSVNCPPNQLHERE
ASPSSSGLREHEYTGQRKNQRSRETSGYLRDRSRSPGSCDSYQEKRMDYDRKRQRSYERS
YYGNSPSVHQHWDSYGSDRDSRGRDRDNYGRDRDSYGRDRDSYGRDRDSRDRDRDSRDRD
RDRDGRGHDRDSRGHKKDRFDHDRDSSDCERHYFSKRCHFRDSDPRHGYYEKSEKGHYYS
DGTYCKINQKRDREYQF
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcactcgaacctgagcggcccgtcgctccctcaactgtcggatacaaataaa
acggagggcgagagctccgcgcagcagctggaaaatgaaaatcgtgtccagatggactta
tatgatgatttgattggtgatataataggagtacctttaaaaaaagaggtagaaccaaaa
aaggacaatttggagtgcacatcaaataatatactcatcccaattaaagctgacccgtct
aaaagttgtgatccggaatatattgatgcaccacttcataaaaaacttatgttgattgga
aatctgacgtggtggactaccagtgatgacttattagctgccattcattctgctggaata
tctagtgttgatgatatgaaattttacgaagttgcaaaaggtggtcagtccaaggggttt
gctagtgtgacattgtctttgaaaagtgatatacaaagattgttaaagattcttccaaaa
aaagaagttcatggaaggaacctggatgtccggcattttacgaaagcaaattaccagtat
tttgaaacccagttcataaatgcaatggaaaaatcaaagttgcattcagcacactgtgat
atttttggttgcaatggaaatgacaaccaatttgtatttgatcctgtggaagaaggatat
ccagacccaattccatggcagatccagcagaagttttcaacgtttataaatcttcgttcg
ttgacaaaggatccagtagtcccggacaaaacctttccaccgttcccacatccacaaatc
agacaaatcacttcagttgttgaaactaaactccatcacggctctacaccattttcaaac
aatatgttattacaaaatttgacttctttggctgtaccacctgtgagcatatcagctgcg
aatattccatctccagttgttggtgcatttccccagtttttcttcaaatacttaacttcg
ttgggaataccacttacaaacatcccagctccacttctcagtacatttccaagatttttc
ttacaaagcttaccttcgtcgccagtatcacctgtgaacgttccaattccggttcttagt
ggacatggactaagtcagatatctcaaacttcttgtgttaatcctgcgacattcataaca
ccaacaataatgggtctttccaccttggacaataataagactccacctgtgtataatacg
tatcataaggattacaagttatcaggaagggaaacaggtgttcaagagacattgcaaagc
atagaggagcctattaaagaacttgatagcaaaggaacgttttcaaccaatgatgatgga
aacaatgattatgggaatctgctgcagcttgtttcttttgttaaaaagtccaaagcaatt
gcaccagacagcttcagggattcagtaaactgtcctccaaatcaacttcatgagagagag
gccagcccaagcagctcaggattacgggagcatgaatacactggacaaagaaaaaatcaa
agatctagagagacaagtggatatctgcgagatcggtccagaagtccaggttcctgtgat
agttatcaagagaaaagaatggattatgatcgcaaaagacaacggagttatgaaagaagt
tactatggaaattcaccttcagttcatcaacattgggacagctatggctctgatcgggac
agccgaggccgtgatcgggacaactatggccgtgatcgggacagctatggccgtgatcgg
gacagctatggccgtgatcgggacagccgtgaccgtgatcgggacagccgtgaccgtgac
cgtgatcgggacggccgtggccatgatcgggacagccgtggccacaaaaaagacaggttt
gaccatgacagggacagctctgattgtgaaagacattatttctccaaaaggtgtcacttt
cgggatagtgatcctcggcatggttactatgaaaagagtgaaaaaggacactattacagt
gacggaacgtattgtaaaataaatcagaaaagggacagagaataccaattttga
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