Hemiscyllium ocellatum (epaulette shark): 132828921
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Entry
132828921 CDS
T09720
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc02010
ABC transporters
hoc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132828921
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132828921
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoc02000
]
132828921
Transporters [BR:
hoc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132828921
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
132828921
NCBI-ProteinID:
XP_060702103
LinkDB
All DBs
Position
28:complement(31765101..31881141)
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AA seq
1979 aa
AA seq
DB search
MTSFSEFWDAVQWLNSPNATRSPTMMFQTISKIVCGHLDGGGLQIPFMNWYEDDNYKAFF
GRNSTDEKIITFNNLTAPHCNDLLKTLESYSSIMWKSIKPLFVGKILYSPDTPATLKIMK
EVNRTFEDLSLLQEIRGAWNEAGPQIWKFMESSQEIHLLQKMLRNPAVATLIDLQLNSTS
WTAEGIANFLSSKTEGSENSNYTWKRAYEELDQVINSFSQVFECISLNKLEAVPTEEKLV
VRALQLLEERQFWAGVVFLVDEPTGSEIHTLQPHIKYKIRMDIDYVAPTHKIKDRFWDPG
PEALTIRDLQYIWGGFVYIQDLVEQAIIRVQTNEHKRTGLYLQQMPYPCYVDDGFLRVLN
RSLPLFMILSWIYSVAMIVKRLVHEKEARLKETMKMMGLSNGILWVSWFISSFIPFLISA
AFLTLILKKGEILPYSSPSVVFVFLATFAVSTIMLCFLISTFFSGANLAAACGGIIYFSL
YLPFVLCVAWRNSVTFPLQIFVSLLSPVAFGFGCEYFSLYEEQGIGIQWFNLVSSPVAGD
AYNFTTSIILMLFDALLYGLAAWYIEAVFPGQYGVPKPWYFPVLRSYWCGEFYCKENLFE
FPGNSSTNKVHLEQEPTHLKLGVSIQNLVKVYGNGKKVAINGLSVNFYEGQITSFLGHNG
AGKTTTMSILTGLFPPTSGTAYILGRNIFTEMDTIRKSLGMCPQHNVLFDILTVEEHIWF
YGRLKGLTEEEVNEEIKLMIDDVDLVHKRREQTKNLSGGMQRKLSVAIAFVGGSKVVILD
EPTAGVDPYSRRGIWELLLKYRKGRTIILSTHYMDEADLLGDRIAIISHGKLCCCGSSLF
LKNHLGTGYYLTLVKKENDKTTPASSSSTTIGLRKEDSDSERSYDTGLGSEQCSETGALD
VSTVLALVQKYVSNARLVEDFGHEMTFILPYVGAKDGAFVELFQELDSHLCELGISSYGI
SDTSLEEIFLKVAENTGVDSDIADGNVPIKRVRCSRSSEHTLQPVSEEGDFELPDAEPEP
KETDFMQCMEGRGSFQLRGWQLTRQQFHSLFIKRFLYARRSRRGLFAQIVLPALFVFIAL
FFSMIVPPFGKYPPLELSPWMYGEQYTFISDDFPEDPITHDLISALLSDPGFGTKCMESE
KNESMQCQDGGTDWITPQVSESILKIFHRGNWTMQNPSPACVCSSKKTQRMLPLCGEGAG
GLPPPQLQRNTGDILQNLTGRNVSDYLVKTYPQIISKSLKTKKWVNEFRYGGFSLGARSS
QVLPSLSEVNISTIEIRSRLNVTKGSSMDRLLGNIGNFIEGLNTNNNVKVWFNNKGWHAM
VSFVNVMSNAVLRANLPPGKDPRRFGITAFNHPLNLTKEQFTEVALIGTSVDLLVSICVI
FAMSFVPASFVLFLIEERVSKAKHLQFVSGVKPGIYWLANFAWDMCNYAVSATLVVIIFI
CFQQKSYVSAPNLPALILLLFLYGWSITPLMYPASFLFSIPSSAYVALTCVNLFIGINGS
VATFVLELFHDKKLDDVNQILKKVFLIFPHFCLGRGMIDMVKNQAMADAYERIGEKMFTS
PLSWDLVGKNLFAMAIQGIVFFLFTILLQYKFFFKMRSLSLKLPPLETEDEDVARERQRV
MYGGSDGDILVIKDLTKVYRRKKKPAVDRLCVGIPPGECFGLLGINGAGKTSTFKMLTGD
TEVSSGEAFLDGYSILSNIQDVHQNMGYCPQFDAINKLLTGREHVEFYSRLRGIPEHEVA
KVTEWAMKKLGLSRYADRPSGTYSGGNKRKLSTAIALIGCPPVIFLDEPTTGMDPKARRF
LWNCILSVIREGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKSRFGDGYTII
LRMDSTTLDLSNVEEFMVSTFPGCVLKEKHHSMLQYQIPTGCCSLAKIFSALMTNKEKLK
IEDYSVSQTTLDQVFVNFAKDQSEDYYLKDIFTHGPQHKDTMKRITNFLADENMRESSV
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcttttctgaattctgggatgcagttcagtggttaaatagtccaaacgctact
agatcaccaaccatgatgtttcaaacaatatcgaagattgtttgtgggcatttggatgga
ggtgggctgcaaatacctttcatgaactggtatgaagatgataactacaaggccttcttt
ggcaggaatagcacagatgagaaaattatcacttttaacaatttaacagcacctcactgt
aatgatctacttaagactcttgaatcttactcttcgatcatgtggaaaagtatcaagcca
ctatttgtagggaagatactgtacagtccggatactccagctacactgaagataatgaaa
gaggtgaacagaacgtttgaggatctaagcttgttacaagagatacgaggagcctggaat
gaagctggaccccagatctggaagtttatggaaagtagtcaggaaatccatctcctgcaa
aaaatgctgaggaaccctgctgtcgcaacacttattgatctacaacttaattctacctct
tggactgcagaaggtattgccaactttctgtcgagcaaaactgaagggagtgagaattcc
aattacacctggaaacgagcttatgaagaattagatcaagtgatcaactctttctcccag
gtctttgagtgcatatctctgaataaactagaagctgttccgaccgaagagaagttagtg
gtccgtgcgttgcagcttctggaggaaagacagttctgggctggagttgtgtttttggtt
gatgagccaacaggtagtgagattcacacccttcagccccacatcaaatacaagattagg
atggacattgattatgtcgctccaacccacaaaatcaaggacaggttttgggacccagga
cctgaagccctcacaattcgggaccttcagtacatctggggaggatttgtttacatccag
gatttggtggaacaggcaattattcgagtacagaccaatgaacacaagaggactggactt
tatttacaacagatgccttatccatgctatgtggatgatggtttcttgcgagttttgaac
cgttcgttgcccctcttcatgatcctgtcttggatttactcagtagcgatgatagtcaag
aggctggttcatgagaaggaggcacggctaaaggagacaatgaagatgatgggactgtct
aatggaattttgtgggtcagctggttcatcagtagcttcatccctttcctcatcagtgct
gcttttctcacgttaatcctgaagaaaggagagattctcccatacagcagtccctctgtt
gtatttgtattccttgcaacctttgctgtttccaccatcatgctgtgtttcctgatcagc
acgttcttctctggtgcaaacctagcagccgcttgtggtggaatcatttacttctccctc
taccttccatttgtcctgtgtgtggcatggagaaactcggtcactttcccactccaaata
tttgtgagtctgttatctccagttgcgtttggttttggatgtgaatatttctctctctac
gaggagcaaggaattggtatccagtggtttaaccttgtctccagccctgtagcgggcgat
gcatacaattttacaacttcaatcatcctcatgctgtttgatgctctcctctatggcctt
gcagcatggtatattgaagcagtgtttccaggtcaatatggagttcccaaaccctggtat
ttccctgtcctcaggagttactggtgtggagagttctattgtaaagagaatttgtttgaa
ttccctggtaacagcagcactaataaagtccatctggagcaggaaccaacacacctcaaa
ttgggggtgtccatccagaacctagtgaaggtttatggaaatgggaagaaggtggctatt
aatggactgagcgttaatttctatgagggccaaatcacctcatttttggggcataatgga
gctggaaaaacgactaccatgtccatcctgactggattgttcccacccacctctgggaca
gcatatattctgggcagaaatatcttcacagagatggatacaatcagaaagtcactaggg
atgtgtccacagcacaatgtactttttgacatactgactgtggaggagcacatctggttt
tatggaaggctgaaggggctgactgaggaggaggtaaatgaagaaattaagttgatgatt
gatgatgtggatttggtgcacaaacgtagagaacaaacaaaaaatctctcaggtggcatg
caacgaaagctttcagtcgccattgcatttgttggcgggtcaaaggttgttattttagat
gaaccaactgctggcgttgacccttactcccgccgaggaatatgggagctcttgcttaaa
tacagaaaaggccgcactataatattatcaacccattacatggatgaggcggacctcctc
ggggacagaatcgccatcatctcccatggaaagctctgctgctgtggctcttcactgttc
cttaaaaaccatttaggaactggctattacctgacgttagtgaaaaaagagaatgacaag
acaacgccagccagctccagcagcaccactattggtctgaggaaggaggacagtgattct
gagaggagctatgatactgggcttggcagtgaacagtgcagtgaaactggtgcattggat
gtatcaaccgtcctagcactagtccagaaatatgtatccaatgcacgtctggtggaagac
tttgggcatgaaatgacttttattttaccctatgttggtgcaaaagatggtgcttttgta
gaactcttccaggaattggacagccatctctgtgaacttggaatttccagctatggcatc
tcagacactagcctggaagagatttttcttaaagtggctgaaaacactggagtggacagt
gatattgcagatggaaatgttcccattaaaagagtcagatgttcacgatccagtgagcac
acactgcagccagtcagtgaggaaggggattttgagctacctgacgcagaacctgaaccc
aaggagactgactttatgcaatgtatggaaggcagaggttcattccagttacgtggctgg
cagctcacccgacaacagttccattccttgttcatcaagcgcttcctgtatgctcgccga
agtcgcagaggactttttgctcagattgtgctgcctgcattgtttgtgtttattgctctg
ttcttcagtatgattgtgcccccatttgggaaatatccaccattagaactgagtccctgg
atgtatggagaacagtacactttcatcagtgatgacttcccagaggatccaatcactcac
gatctgatcagtgcactcctcagtgaccctggatttggcaccaaatgtatggagagtgaa
aagaatgagagtatgcagtgccaagatggtggaactgattggataactccccaagtttca
gaatccatcctgaagatctttcaccgtggtaactggactatgcaaaacccatcccctgcg
tgtgtgtgcagctcaaagaagacccagaggatgttgccattatgtggagaaggagcagga
gggctcccgccccctcagttgcagcgaaatactggggacattcttcagaatctaactggc
aggaatgtatctgactacctcgtgaaaacctacccccagatcattagtaaaagtctgaaa
actaagaagtgggtgaacgagttcaggtatggaggattctcattgggagcacgaagttcc
caggttttaccttccttgagtgaagttaatatctccactattgagatcagatcacgattg
aatgtcacaaagggtagttccatggaccgactgctgggaaacatcggaaactttatcgag
ggcttgaacacaaataataatgtgaaagtctggttcaacaacaaaggctggcatgccatg
gtgagttttgtgaacgttatgagcaatgccgtgctgagagcaaatcttccaccagggaaa
gatcccagaaggtttgggattactgcattcaatcacccactgaatctgaccaaagaacag
ttcactgaagtcgcgctgataggtacctctgttgatttgctcgtctccatttgtgtcatc
tttgccatgtcctttgtgccagccagctttgttctcttcctcattgaagaacgtgtcagc
aaagccaagcaccttcaatttgttagtggtgtgaaacctggcatttattggcttgcaaac
tttgcatgggatatgtgtaattacgcggtgtcagcaacactggtagtgatcatcttcatc
tgctttcaacaaaaatcttacgtatctgcccccaatttgccagcactgatcctcctgctc
ttcctttatggctggtccatcactcccctcatgtatccagcatcctttttgttcagtatc
cccagttccgcctatgtggcactaacctgtgtaaatctgttcatcggtatcaatggcagc
gtggccacctttgtcctagagctcttccatgacaagaaattggatgacgtcaatcaaatc
ctgaaaaaggttttcctcattttcccacatttctgcctgggccgaggcatgatcgacatg
gtgaagaatcaagctatggcagatgcgtatgagaggattggggagaagatgttcacatct
ccactctcctgggacctggtgggaaagaacctgtttgccatggctatccagggaatcgtc
ttctttctgttcacaattctactgcagtacaaattcttcttcaaaatgagatctctgtct
ttaaaacttccaccattggaaacagaggacgaggatgtagccagagagaggcaaagggtt
atgtatggtggaagtgatggtgatattctagtcatcaaggatctcaccaaagtttacaga
aggaaaaagaaaccagctgtggaccgactgtgtgtgggaattcctcctggagagtgtttt
ggactgctggggatcaatggagctgggaaaacatccacgtttaagatgcttacaggtgac
actgaggtcagcagtggtgaggccttccttgatggatatagcattctatctaacatccag
gacgtgcatcagaacatgggatactgccctcagtttgatgccatcaacaaactgctgaca
ggtcgggaacatgttgaattctactcacgactacgtggcattcctgagcacgaggttgct
aaggtcactgaatgggccatgaagaaactaggactctcacgctatgcagacagaccttct
gggacgtatagcggtggaaacaaacggaaattgtcgactgccattgcactgattggatgc
ccaccagtcatctttctggatgaacctacgacaggaatggatcccaaggccaggcggttc
ctctggaattgcatcctgagtgtgatcagagaagggagatcagtggtactcacctcacac
agcatggaggaatgtgaggctctgtgcacaaggatggccatcatggtgaatggacgattc
cgttgccttggcagtgtacagcacttgaagagcaggtttggagacggttacaccatcatc
ctgaggatggatagtactacgctggacttgtctaatgttgaagaattcatggtatccacg
ttcccaggctgtgtgttgaaggaaaagcaccacagcatgttgcaatatcagataccaaca
gggtgctgctccctggccaaaatcttcagcgccctcatgaccaacaaagaaaaactgaag
attgaagactattcagtgtctcaaactacattagatcaagtatttgtcaattttgccaag
gaccaaagtgaagactactatttgaaggacattttcacacacggaccccaacacaaggac
actatgaagcgcatcacaaattttttagcagacgaaaacatgagagagagttcagtatga
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