KEGG   Hemiscyllium ocellatum (epaulette shark): 132828988
Entry
132828988         CDS       T09720                                 
Symbol
ell
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    132828988 (ell)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hoc01009]
    132828988 (ell)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hoc03021]
    132828988 (ell)
Protein phosphatases and associated proteins [BR:hoc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     132828988 (ell)
Transcription machinery [BR:hoc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     132828988 (ell)
    Little elongation complex (LEC)
     132828988 (ell)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing Taxilin DUF2203 Uds1 EzrA
Other DBs
NCBI-GeneID: 132828988
NCBI-ProteinID: XP_060702219
LinkDB
Position
28:2242408..2388553
AA seq 611 aa
MAALKEEQSYGLSCGKLSSASNLSVLHVKLTDSALRALEAYQNCKSNLSCQPGIRFEGNQ
GRITIPRPDCPNEVRTFTFYLCNVGRDNPQCSFDCIQQYQSRFGNVMLDCLGGIQDKITV
CATDDSYQMTRERMTQAEEETRSRGAIVIKLGGRYRAKRVLRKPAPGIPDAVPQRRRPTP
VNLANTMKKYVSNVSDRPYRDRVIHLLALKPYKKPELILRLQKDGITQQDKDSLENLLQQ
VANLNVKDGTFTLKDFAYKEIQRDWPGYSDGDQQLLKRVLVRKSCQPHNTTGGSGETPSS
SPKDSANSASPPQKRSLPNDFIDPLANKKPRISLLTSRVPPTLNGRLNPSNGKETGAPSV
QTTAADSISSTSTLPMLVENQRPNNLSSEVSNDSSHNGQDSESQETPERAVCPRPPHFPR
PSAPLLHVKSKKKSKKHKDKERVKDKGGSEKGCGELVRDSEFLQSCKEQKKTVPPKAAGL
NGMCNSSSVPTSTSDVPDYLLKYSAIESQEQRQGYKTDFNAEYNEYRDLHSRIESITRRF
TQLDAELKQLSPGSADYKSTHDQILQEYRKIKKTNPNYSQEKYRCEYLHNKLAHIKKLIA
EYDQKQLQSWR
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaggaggagcagagttatgggctctcctgtgggaaactcagctccgcg
agtaacctctcggtccttcatgtcaaactcaccgacagcgcgctgcgggcccttgaggct
taccagaactgcaagagcaatctgtcttgccagcctgggattcgttttgaaggaaatcaa
gggcggatcaccattccaaggccagattgcccaaatgaagtgcggacattcacgttttac
ctttgtaatgtcggcagggataatccccagtgcagctttgactgtattcagcagtatcaa
tcccgcttcggtaatgtgatgttagactgtcttggaggcatacaggataaaatcactgtg
tgtgcgactgatgactcctaccaaatgaccagggagcgtatgactcaagcagaggaggag
actcgaagtcgtggcgctatagttattaaactgggaggccgatacagagctaaacgggtg
cttcgcaaaccagcacctggtatccctgatgctgttccccaaaggaggcgaccaacacca
gtgaacctggcaaatacaatgaagaaatacgtcagcaacgtttctgatcggccctatcga
gaccgggttatccacttgttggctctcaaaccttataagaaaccagagttaattcttcga
ttgcagaaggatggaatcacccaacaggataaggactctttggaaaatctcttacaacag
gtggctaacctgaacgttaaggatggcacctttaccctgaaagactttgcctacaaggag
atccagagagattggcctgggtactctgatggtgaccagcagttactgaagagagttctt
gttcggaaatcctgtcaaccacacaataccactgggggctctggggagacaccttcatca
agtccaaaggacagtgcaaattcagcctctccaccacagaaacgctcactacccaatgat
ttcattgatcctctggccaataagaagccaagaatatctctgttgaccagccgggttcca
ccaactttaaatggcaggttaaatccatccaatgggaaagagacaggagctccttcggtg
caaaccaccgcagccgattcaattagctccacctctaccttgccaatgcttgtggagaat
cagagaccaaacaatctttcatcagaagtcagcaacgattcgagtcacaacggccaggac
tcagaaagccaggagaccccagagcgagcagtttgcccacgaccccctcattttcctcgt
cccagtgcacctttactccacgtcaagtcaaagaaaaaatctaaaaagcacaaagacaag
gagcgagtgaaggacaaaggaggcagcgagaaagggtgcggagaacttgtaagagacagt
gagtttcttcagagttgcaaggagcagaagaaaactgttccaccaaaggctgcagggttg
aatgggatgtgcaacagctcaagtgttccaacatcaacatcagatgtgcctgattattta
ctcaaatactcagcaattgagtcacaggagcagagacaaggttacaaaactgatttcaat
gcagagtacaatgagtaccgggacctgcactccaggatagagagcatcaccaggcggttt
acacagctggacgctgagctgaagcagctctctcccgggtctgcagactacaagagtaca
catgaccagatcttacaggagtatcggaaaattaagaagacgaatcccaattacagccag
gagaaatatcgctgtgaatatctacacaacaaactggctcacattaagaaattgatagca
gaatacgatcagaagcagctgcaatcctggcgttag

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