Hemiscyllium ocellatum (epaulette shark): 132829007
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Entry
132829007 CDS
T09720
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hoc03029
]
132829007 (polrmt)
Enzymes [BR:
hoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132829007 (polrmt)
Mitochondrial biogenesis [BR:
hoc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
132829007 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_3
Motif
Other DBs
NCBI-GeneID:
132829007
NCBI-ProteinID:
XP_060702250
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All DBs
Position
28:complement(15728274..15839552)
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AA seq
1301 aa
AA seq
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MSILRLCSSRSSRPATLRELLLLPSGCHRCLQLRRHSVRSSELPWGFFRRNYSSIIPKKN
VGKDQPCEKTRLLQVLEARMQQLQADNITEVKCTEVQFVNRINVTHDESHNSTNNLTFLP
DQEFKKSLNLSTEAFVEEKIAKEQMGKKCHTEPAIPKTASAPRKWIEKLDKEKRNKTRRQ
LNIVKKIKESLQLSSTKSVTSAKTTETGSKSTSKGNVAKAPVTHGARPSVMSNREAKSNA
LHDFSVEGILAEVENLDQQLINWEPSAKLLEDQEGNRYGDAQRSILSYVEACAFINDLDR
AHQCVMFHHRILTRRKQLNIKIYSVLMQLWAKKGSLSQIGNLFSLVEEAGLKPNLGCYMA
ALECMGRMENCSPHVIERCFQQLKEDGFTIQDLFKNCVFHKDEREMIMKAIWAVDPEFQL
QPEPEVEICQSPLVKHFYSKIEPIKYPKLHLCLEQLKERFDRQLSREQEDTISISSVEAT
KPITEKMKRMRNRLADLRAKWHKSLLQAFREFKFHLAGDRSCSWKMNLYPYLCLLDDKEY
VDIMIQSIANIPPNGEALLTIAKELGNRVYNKYSIRKKIKNEMVDKIKQIYYAYIELLAK
DTELNNFLPREHMVKVEKEMNLGLSLLGEDSPWPHFLIIDLGTHLVDLMVHEIKIPMNTQ
SPSQERKFIPVLYHMYSFRSNKQIGFIKPHPILTELLSQAAETTLIFDSCVMPMVCAPIP
WTSPRFGAYILAPTKLMRCVEGALQHQLLLEKCKSSDLHPVLDSLTQLGNCAWKVNKPIL
DLIISIFNDKGNEKLEIPPPLSEAPHMPKYDPKADISPAAKSVLKKKIAWVRKRAAEMHS
LRMDALYKLSIANHVRDDIFWFPHNMDFRGRTYPCPPYFNHLGSDVTRAVLLFAEGKPLG
EHGLNWLKVHLVNLTGFKKKCSLKDRIDYADKVMDDILDSADNPLTGRKWWMNADEPWQT
LACCKEIAHAIRSPDPSKYISYFPVHQDGSCNGLQHYAALGRDVIGAASVNLMPEEVPQD
VYSAVAQQVEEFRKRDAEKGVKIAQILEGFINRKVVKQTVMTVVYGVTRFGGRLQIEKRL
KEVEDFPKDHVWDASHYVVQLVFSSLTEMFTGTREIQDWLTQSARLISKSGSSVEWVTPL
RLPIVQPYHRTRTTLLRSNLQNLNLQISHDATQRPDTVKQKNAFPPNFIHSLDSTHMMLT
ALYCYSAGVTFVSVHDCFWTHAFTVDVMNKVCREQFVALHSQPILQDLSKFLVNKYRYNI
PADRKSKKLQDYQRMMELLSKELKIGEFDLEKVKESTYFFS
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattctgaggctctgttcttctcggagttcccgtcccgcgactttgcgggaattg
ctgcttcttccctccggttgtcaccgttgtctgcagctcaggagacattccgtgaggagc
tcagagctgccttggggtttcttcagaagaaattactcttctattattcctaagaaaaat
gttggaaaggatcaaccctgtgagaaaactcgtttgttacaggttctcgaagcccgaatg
caacaacttcaggcagataacatcactgaagtaaaatgtacagaggtgcagtttgtcaac
cgaataaatgtaactcatgatgaaagtcacaacagtacaaataatcttacttttctgcca
gatcaagaatttaaaaaatctcttaacctgagcacggaagcatttgtagaagaaaagata
gctaaagaacagatgggaaagaaatgtcacacagaaccagcaattccaaaaactgcttca
gcgccaaggaaatggatagaaaaattagacaaagagaaacggaacaaaaccaggagacaa
cttaatattgtgaaaaaaatcaaagaatctctacaattatcaagcacaaaaagtgttact
agcgctaagaccactgagacgggcagtaaaagtacatcaaaaggcaatgttgcaaaggca
ccagtaacgcacggagccagaccttcagtaatgagtaatcgggaagcaaagtcgaatgca
ttacatgatttttctgtggaaggtatacttgctgaagtggaaaaccttgaccaacagctc
attaattgggagccttctgctaaactgcttgaagatcaagaaggcaacagatatggtgat
gcccagcggagtattttatcctatgttgaggcttgtgcattcattaatgatctggacaga
gctcatcaatgtgtcatgttccatcatcggattcttactcgccggaagcagttgaatata
aagatttatagtgttttaatgcagctgtgggctaaaaagggttcattaagtcaaattggc
aaccttttcagtctggtggaagaggctgggttgaagccaaatttgggatgctatatggca
gcattggaatgtatggggcgcatggaaaactgttccccccatgtgattgagagatgcttt
caacagttaaaggaagacggcttcacaatacaagacttgtttaagaattgtgtgttccat
aaagatgaaagagagatgataatgaaagccatttgggctgtagatcctgaattccagctc
caacctgaacctgaagtggagatttgccaatctccattagtgaagcacttttattcaaag
attgagcctattaaatatcccaaattgcatctgtgtttggaacaactaaaggagagattt
gatcgacaactgagcagggagcaagaggataccatttctattagctctgttgaagcaaca
aaacccattacagagaaaatgaaaagaatgcgtaaccgtttggcagatttacgtgccaag
tggcataaatctctactgcaggcatttcgtgagttcaagtttcacttggctggtgaccga
agttgttcctggaaaatgaatctctatccttatctctgcctgctggatgataaggaatat
gtagatataatgatacagtctattgcaaatatcccgccaaatggtgaagcattactgaca
attgctaaggaattgggtaacagagtctacaacaagtattccatacggaagaagatcaaa
aatgaaatggtagataagattaaacaaatttactatgcctacatcgaactgttggcaaag
gatacggagctgaacaacttcctgcctcgtgagcacatggtgaaagtagaaaaagagatg
aatttaggtctttcgctattaggtgaagattctccctggccacattttctgatcatagat
ttgggaactcatctcgtagatctaatggttcatgaaattaaaatccccatgaacacccaa
agcccaagtcaagagaggaaatttatcccagtcttgtatcacatgtacagctttcgcagt
aacaagcagattggtttcatcaaaccgcatcctattctaactgagctcctttcgcaagct
gctgagacaacattaatctttgactcctgtgtcatgccaatggtctgtgctcccatccca
tggacttcgcctcggtttggagcctatattctggcacctaccaaattaatgcggtgcgtg
gaaggagctctacagcatcagttactcctggagaaatgcaagagtagtgacttgcatcca
gtgctagattctttaactcagcttggtaactgcgcttggaaggttaacaaaccaatcctt
gatttgattatttctatttttaatgataaaggaaacgagaagctggagattccacctcca
ctttcagaagcaccacacatgcccaagtatgacccaaaagctgacattagtccagcagca
aagtctgtattgaaaaaaaagatagcttgggtcagaaaaagggcagctgaaatgcacagt
cttcgaatggatgccctttacaagctttccattgccaaccatgtcagagatgacatattc
tggtttccgcacaacatggattttcgaggaaggacgtatccctgccccccatattttaac
cacctgggcagtgatgtcactcgtgcagttttattatttgcagaaggaaaacctttggga
gaacatgggttaaattggttgaaagttcatcttgttaacttaaccggctttaagaaaaag
tgttcccttaaagacagaattgattatgctgataaagtaatggacgacattttggattcg
gcagataaccctttaacagggaggaagtggtggatgaatgcagatgagccttggcaaaca
ttggcttgttgcaaagagatagcacatgctattagatcacctgatccaagcaaatacatc
tcttatttcccagtccaccaggatggctcttgtaatggtttgcaacactatgctgctcta
ggacgtgatgtgattggtgcagcctctgtgaacctaatgcctgaagaggtaccacaggat
gtttacagtgcagtagcacaacaggttgaagagttcagaaaaagagatgctgaaaaaggt
gtaaaaattgctcaaatcttggaaggcttcattaatcgcaaggttgtgaaacagacggtg
atgactgtggtgtatggtgtgacacgatttggtgggcgtctccagattgaaaaaagattg
aaagaagttgaggattttccaaaggatcatgtgtgggatgcttctcattacgtggtgcag
ctggtcttcagcagtttgacagaaatgtttaccggaaccagggaaattcaggactggctg
acacaaagtgcacgactgatttccaaatcaggaagttcagtggagtgggtgacgccactt
aggctaccaattgtacaaccttaccataggaccaggactacattactcagaagcaatctt
caaaatttgaatttgcaaataagtcatgatgcaactcaacgacctgacacagtcaagcag
aagaatgcttttcctccaaatttcattcattctcttgattcaacgcacatgatgctgaca
gcactgtactgttatagtgctggggtaacatttgtttctgtccatgactgcttctggacg
cacgcattcacagtcgatgtcatgaacaaggtttgccgtgagcagttcgttgccctgcat
agccaacctattcttcaagatctttccaaattcctggtaaacaaataccgctataacatt
ccagctgatcgaaaaagcaagaagcttcaggactaccaaagaatgatggaattactttct
aaagaactgaagataggtgaatttgatctagagaaggttaaagaatctacttatttcttc
agctga
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integrated database retrieval system
