Hemiscyllium ocellatum (epaulette shark): 132829476
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Entry
132829476 CDS
T09720
Symbol
dscaml1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hoc04515
]
132829476 (dscaml1)
Cell adhesion molecules [BR:
hoc04515
]
Immunoglobulin superfamily
DSCAM family
132829476 (dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_6
V-set_CD47
Interfer-bind
DUF1461
Motif
Other DBs
NCBI-GeneID:
132829476
NCBI-ProteinID:
XP_060702663
LinkDB
All DBs
Position
29:complement(47067763..47605294)
Genome browser
AA seq
1912 aa
AA seq
DB search
MRGSVAVFKCLIPPSVQEYVSVVSWEKDTVSIIPGSRFHITSYGALYISDVQKEDALSTY
RCITRHKYSGETRQSNGARLSVSDPMESAPTVLDSFQSKEVKTGETMELPCIASGYPNPV
IRWLKDNRPLPVDSRWTKRITGLTINNLHVEDSGMYICEVTNTFGSAEVTEIIKVIDPLR
VTVTPKKLKTGIGSTVILSCSVMGSPEYVIRWYRDTELIIPDGYISVRGINNDTLLITSA
QKSHSGAYQCFATRKSQTAQDFSIIVLEDGTPRIISSFSEKVVNPGEQFFLMCTAKGAPP
PTLTWTLDDELIIRDSSHRSNQYTLTDGTAVSHMNVTNPQIKDGGVYRCAARNLVGSAEY
QARINVRGSPSIRPMRNITAIAGRDTFINCRVIGYPYYSIKWYKDSILLPDNHRQAVFEN
GTLKLMDVQKGMDEGEYVCSVLVQQQHSISQRVHVAVKVPPLIQPFEFPPASIGQLLYIP
CVVSSGDMPIRITWRKDGQVILSGSGVTIETKEFMSSLQISSISLKHNGNYTCIASNDAA
TVMRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYH
PVPLTGRIQILGNGSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPN
TTIAIKGQNKELNCTARGERPIIIRWEKEDTVIDPDRMFRYSVATKDNGEEVVSTLKITP
ADRGDSGFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSL
ILGFDIEYKNKSDSWDLKQSTRNINPTINQANIVDLHPASVYSIRIYSFNKIGRSEPSKE
LTVSTEEAAPDGPPMDVILQPITSQSIRVTWKAPKKELQNGVIRGYQIGYRENGPGSNGQ
YSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPDN
VKAVSISSDVVTIVWSPPPQSTLNGVLKGFRVIYWSVHQDGEWGEMRNITTMENRVELKG
LEKFTNYSVQVLAFTQAGDGVRSLVLYTQTKEDIPGPPAGIKAVPSSANSVVVAWLPPTK
PNGIIRKYTIFCSSPGSGQPTTLSEYEASPDTLYYRIPNLNYQQQYLLWVAAVTSAGRGN
VSNKVTGEPAAKVPAKIIAFGGTVTTPWMRDVLLPCRSVGDPGPTIKWTKDSEDSAIPVQ
VDGHRMIFNNGTLFLRSVRAEDSGYYTCTATNTWDSDKIVVNLLVQVPPDQPRLTVSKTS
SSTITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFINPTERSFKLDHLKCGTWYKVKL
AAKNSVGAGRISEIIEAKTHGREPAFDKDRHLFTHINSTHARLNLQGWNSGGCPITAIVM
DYRPKGTWPWLTLKTNLSHEVFLQDLQGATWYELKMRACNSAGCGNETTHFATLDYDGST
IPPIKSIQGEGDDVKKLFTIACPVILATVAVALLFIIRKKRKEKRLKRLRDAKSLAEMLI
SKNNRSFDTPVKGQPQGPRLHIDIPRVQLLIEDKEGIKQLDDKATIPATESEFSQSVNPQ
SFCTGVSLHHPAMIQNTGPLIDMSDIRPGTNPVARKSVKSAHSTRNRYSSQWTLTKCQAS
TPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYE
HAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPSEAGICRFTASPPQP
QDVDRGKNVAVPIAHRAGKDLHSRGIQRTPGDYCNLPLYVKSEAFFRKSDARDPCPVVPP
REASIRNMARAYQTQSRHMTLDPNSKPPIHPHATATLPQRTVTASSSTATASANTAAVTA
PASTANAPAEPRLPTHTKIGGSRDSLLEVSTAGLNRSQKQGAGAYSKSYTLV
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggaagcgtggctgtcttcaagtgcctcattcctccttcggtgcaggagtatgtt
agcgttgtgtcttgggaaaaagatacagtctcaatcatcccagggagtagattccacatc
acatcgtatggagccttgtacatatccgatgtacaaaaggaggacgcgctgtctacatac
aggtgtatcaccagacataaatacagtggagaaacgcgccagagcaatggagcccgtctc
tcagtttccgatcctatggaatcagcgcctacagtgttggacagttttcagtccaaagaa
gttaaaaccggggaaaccatggaacttccatgcatcgcttcaggttatccaaacccagtg
atccgctggctgaaagacaacaggccattgccagtcgacagccggtggaccaagcgtatt
acaggcctgacgattaacaacctacatgtggaggacagcggcatgtacatctgtgaagtg
acaaacaccttcggctcagcggaagtgactgaaatcattaaagtcatagatccgctgagg
gtaacagtgactccaaagaaactgaaaactggaattggcagcaccgtcattctgtcgtgt
agtgtgatgggttctcccgagtacgtcatcaggtggtacagagacacagagctcatcatt
cccgatggttacatctctgtccgaggaatcaataacgacacattgctgatcacatctgct
cagaagagtcactcgggagcctatcaatgctttgccaccaggaaatcccaaactgcacag
gacttctccatcatagtgttagaagatggaacaccccggatcatctcgtcctttagcgag
aaagtggtcaacccaggcgagcagtttttcctcatgtgcacagccaagggtgcccctccg
ccgaccctcacctggacgctggacgacgagttgataatcagagacagcagccatcggtct
aaccagtacacgctgacagatggcactgccgttagccacatgaatgtcaccaacccgcag
atcaaagatggaggggtttaccgctgcgcagcaagaaatctcgtcggcagcgccgaatat
caagcgcgaataaacgtaagaggctcacccagtattcgccccatgaggaacatcactgcg
attgctgggagagatactttcattaactgccgggtgattggatatccgtattactcaatc
aaatggtacaaggactcaatattacttcctgacaatcacaggcaggcagtgtttgagaac
ggaaccttgaagctgatggatgtgcagaaggggatggacgagggagagtacgtgtgtagt
gtcctggtgcagcagcaacactccatcagccagcgagtgcacgttgccgttaaagttcct
cccctaatccaaccctttgagtttccgccagcatcgataggacagctgctctacatcccc
tgcgtggtgtcctcaggtgatatgcccatacgcatcacatggagaaaggacggtcaggtg
attctctctgggtcaggggtcaccatcgaaaccaaagaattcatgagctccctgcagatc
tccagcatctctctgaaacacaatggcaactacacttgcattgccagcaatgacgctgcg
acggtgatgagagagcgacaacttattgtacgagttccgcctcgttttgtggttcaaccc
aacaatcaggatggcatctatggcaaggctggagttcttaattgttcggtcgatggttac
cctcctccaaaggtcatgtggaagcatgcgaaaggaagtggaaatcctcagcagtaccat
ccagttcctctgacaggccgcattcagatcctgggaaatggttctttgctaattcgccat
gtcttggaagaagacattgggtactatctgtgccaggcaagcaatggtgttggcacagac
atcagcaagtccatgttccttaccgtgaagatcccagcaatgattacttctcaccccaac
accaccattgccattaaaggccagaacaaggaacttaattgcacagcccgtggagaacga
ccaatcattatccgctgggagaaggaggacacagtcattgacccagacagaatgttccga
tattcagtggctacaaaggacaatggggaagaggttgtctcgactctgaagatcacgccg
gctgaccgaggtgactctggcttcttctcttgtcacgcaatcaattcctacggagaggac
aggggacttattcaactcactgttcaagagccacctgacccacctgagctggagatcaga
gaggtgaaggcacgtagcatgaatctccgctggactcagagattcgatggaaacagtctg
atccttggctttgatattgaatacaagaataaatcagattcctgggatttaaagcagagc
actcggaatatcaacccaaccataaaccaagccaacattgtggatttgcatccagcctct
gtttacagtattagaatctactccttcaacaagattggcagaagtgaacccagcaaagaa
ttaactgttagcacagaggaagcagctccagatgggcctcctatggatgtcatattacaa
cccatcacatcccagagcatccgagtaacttggaaggcacccaagaaggagcttcaaaac
ggggtaatccgaggttaccagatcggttaccgggagaatgggcctggcagcaacggccag
tatagtattgtggagatgaaggccacaggcgacagtgaggtttacaccttggacaacctg
aagaagtttgcacagtacggtgttgtggtacaggcattcaacagagctggaacaggtcca
agttcctcagaaatcaatgctacaacacttgaagacgttcccagccaacctccagacaat
gtgaaagctgtttcaatctcatctgacgttgtcaccattgtctggtcaccgcctccacaa
agtaccttaaatggagtgttaaagggcttccgagtcatatattggtccgtgcaccaagat
ggagagtggggagagatgcggaacatcaccaccatggagaaccgagtggagctgaaggga
ttggagaaattcacgaattacagtgtgcaggtgctggcgttcacacaggcgggagatgga
gtgcgtagcttggtgctctacactcaaacaaaagaagacattccagggcctcctgcggga
atcaaagcagtaccctcctcagctaacagcgtggtggtggcctggctcccccctaccaag
ccaaatggaatcatccgcaaatacaccatcttttgttcgagccctggatctgggcagcca
acgacactaagtgaatatgaggcatctccagacaccctgtactaccggatccccaacctg
aactatcagcagcagtacctgctgtgggtggcagcagtcacatcggcaggccgagggaat
gtaagcaacaaagtcaccggtgagccagcagcaaaggtcccagcaaagattattgcattt
ggaggaacagtgaccactccttggatgagagatgttcttctgccatgtaggtctgtgggt
gatccaggaccgacaattaaatggacaaaagacagtgaagactctgccatcccagtgcaa
gttgatggccacagaatgatcttcaacaatgggacattgtttcttcgttcagtaagagca
gaggattctgggtattatacttgtacggcaacaaacacctgggactctgacaagattgta
gtcaaccttctggtgcaagtgccgcctgaccaacctcgtctgactgtgtctaagacctca
tcctccaccattacattggcttggattcctggtgacaatggtggcagctctatcagaggc
tttgtgttgcaatactctgttgacaacagtgaagaatggaaggatgtcttcatcaaccca
actgagcgctccttcaaactggaccacctcaaatgtggcacttggtacaaggtgaaactg
gcagccaagaacagtgttggagctgggcgcattagcgagattattgaagccaaaactcac
gggagagaacctgctttcgacaaggaccggcatctctttacccacattaactctacccat
gccaggctcaacctccaagggtggaacagtggtggctgccccatcacagcaatcgtcatg
gactaccgtcccaaaggcacctggccttggcttacgttaaagaccaacttgtcgcatgag
gttttcctacaggacctgcaaggggccacttggtatgagttgaaaatgagagcctgtaac
agcgctggatgtggcaacgagacaacacattttgccacactcgattatgacggaagcact
atcccaccaatcaaatcgatccaaggagagggagatgacgtgaagaaattgttcaccata
gcttgtcctgtcatcctggcaacagttgccgtggcactcctgttcatcatcaggaagaaa
cggaaggagaaacgcctgaagagactgcgcgatgcaaagagcttggcagaaatgctaata
agcaagaacaatcggagcttcgatactccagtgaaggggcagccacaaggaccccgtctt
cacattgacatccctagggtgcaactgttgatagaagacaaagaggggattaaacagctg
gacgacaaggcgaccattcctgcaacagaatccgaattcagtcagtctgtaaacccccag
agtttctgcactggtgtttctctccaccatccagcaatgatccagaacacagggccactc
attgacatgtcagacatccgacctggaaccaatcctgttgctaggaagagtgtcaaatca
gcacacagcacacggaatagatattccagccaatggaccctaactaagtgtcaagcttcc
accccagcccggactttgacctctgactggagaacggtggggtcacagcatggaataacc
gtgaccgaaagtgatagctacagtgcaagtctctcccaggacacagataaaggccggaac
agcatggtttccacagagagtgcctcctccacctatgaggagttggcgcgagcctatgag
cacgctaagctggaggagcagctacaacatgccaagtttgagatcaccgagtgcttcatc
tctgatagctcctctgaccaaatgacaactggcaccaatgagaacgctgacagcatgacg
tctatgagcaccccgtctgaggctggcatctgcaggtttacagcttcacccccacagccc
caggatgttgaccgcggaaagaatgtggctgtgcccatcgcccacagagctggcaaagac
ctccacagccgtggcatccagcgcaccccaggtgactattgcaaccttcccctctacgtc
aagtcggaagctttcttccgcaaatcagatgcccgtgatccttgcccggtggtgccacca
agggaagcctccatccggaacatggccagggcttatcagacgcaaagccggcacatgacc
ctcgaccccaacagcaagccgcccatccacccgcatgccacagccacattacctcagaga
actgtcaccgcgtcgagctccacagccactgcttctgccaacacggctgccgtcaccgcc
cctgcttccaccgcaaacgccccagctgaaccacggctgcccacgcacactaaaatcggc
ggctccagagactcactactagaagtgagtacagccggactgaacaggtcacagaaacaa
ggagcaggtgcctactcaaagtcctacaccctggtgtaa
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