Hemiscyllium ocellatum (epaulette shark): 132829622
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Entry
132829622 CDS
T09720
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132829622 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hoc03036
]
132829622 (nfrkb)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
132829622 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
132829622
NCBI-ProteinID:
XP_060702911
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All DBs
Position
29:15858623..16015856
Genome browser
AA seq
1280 aa
AA seq
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MDCLDNMLTDPLELGSAAEVNGAGIMEACLLGGTRVSLPEDLLEDPDIFFEVVSRSTWDE
VLSQSQRDHLRKFLPQFTEKNVEQQDDIITGLFNGDNFRFGNPLYIAQKLFRDGYFNPEV
VKYRKLCMKSQYKRYLYSQQQYFHKLLKQILVSRKELLELARKSGPDMTLKRKYQAISSQ
KEQERRAQSRYEKILQEVKEECKDNSISSDEEEMCSWLPGSPTHPMSPSVALRAVPTLST
QDMKTVSKPELGDEDLKIMIRKHVEKRRLQPDHPDLATGDLTFNDIITRMNAGRRGSLAA
LLDLTFPKKRVKDKEERKKKKLKVIKTEPEDLAESSGAEGGTAAAPEQQTVTRPVSAPEQ
TLDATKLTAVPGITGSFFGLLQEILLAEGEASLAGIEEKVLEWQISAPSTLNSWFSDASN
WSELVHSAVRFLSGEGGMSALPSNFEPYVSCTERGQQWKWIGSGRDSEKEVTTLCQLWFE
VKDQIFPKVHISNNWKESEELPDIIPPTPRMRTDYVVRPSTGDEKRVFQEQERQRYSQPH
KAFTFRMHGFDSVVGPVKGVFDKDPSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNG
EGTRAEICELLKDSQFLAPEVTSAQINTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRN
RSEEEFERIHQAQAAAAKAKKALQQKPKLTTKIKSSAKESTTKLPVSEQSLASQVLADSS
LPVTPVTPVTPTLPVTPTSPPISTDGNKVPTTSAPELVKSGQSVLLVSSPTMPQLGNLLS
GTQPGQYTGPQTPARILSQSVAAPLPQVRVVSAQQGLTSTSHQTSVVQQVQQHQHQMRLP
AVTAAAHTKVLPQSILTVPVKAQSGASTVHIQQGSAKTNLTMAGISAASKTVSSTLNSTT
SSSPSIIIQSVAGQSIMRQVAIAGQLGVKTQSSTGIPLTATNIRTKGKDVLRLAPSSITT
DSKGQTVLRITQDMMATLTKAPVTTVKLTPDLLAGKGISATLHVTPAMQSTDSMVKASTS
TTSSTTSTVVKVTPDLKVTEASSTAIRLMPALAVTVADQKAKVSAPLSSTDTKPAATIRL
MPGLGVIPKSGQAIAVATSSKLFTAAGTMTSAAVTLATAGSKAITKVTPTAGLPISIGTG
TATVRQVPVSATMVSTTQATKLPATITVPLSVLNQPLKGKGVMAGPIIKGNLGANISGLG
RNIILTTMPAGTKLIAGNKPVSFVTAQQLQQLQQQGQATQVRIQHLPAQQLHQGTVISST
KPISTVVVTTAPSVKPSQDQ
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggactgtctggataatatgctgacagaccctttggaactgggttcagctgctgaggtc
aatggtgctggcatcatggaggcgtgtttacttggtggaaccagagtcagtcttccagag
gatctactggaggatcctgatatcttctttgaggtggtgagtcgcagcacctgggatgaa
gttctgtctcagtcccaaagggatcacttgaggaaatttcttccacagttcactgagaaa
aacgtggagcaacaggatgacatcattacaggcctcttcaatggagataacttccgcttt
gggaatcctttgtacattgcgcagaagctctttcgagatggctactttaacccagaggtg
gtcaagtacagaaagctgtgtatgaagtcacagtataagcggtacctgtactcccagcag
caatacttccacaagctactaaaacagatccttgtctccagaaaggagttgctagagctg
gcaagaaagagtggccctgacatgactctgaaaaggaaataccaggcaatttcgagtcag
aaggagcaggagaggcgagcacagagtcgatacgaaaagattctgcaagaggtcaaagag
gaatgtaaagataacagcatctcatctgatgaggaagagatgtgttcctggcttccgggt
tctccaacacaccccatgagtcccagtgtggcgctgcgagctgtaccaaccctctccaca
caggacatgaagacagtcagtaaacctgaactgggagacgaggatttgaaaataatgata
aggaaacatgttgagaagcgaagactacaaccggaccatccagaccttgcaactggtgac
ttgactttcaatgatatcatcactcgtatgaatgctggccgacggggctcactggcagct
ttactagatcttacattcccaaagaagcgagtgaaggataaagaggagaggaagaaaaag
aaactcaaagtgataaaaacagaaccagaggatttagctgagtcatcaggagctgaggga
ggtactgcagcagctcctgaacagcagactgtcaccagaccagtctctgctcctgaacag
actctagatgcgacgaagctgacagcagttcctgggatcacaggcagtttctttggtttg
ctacaggagattttgcttgcagagggagaggcaagtttggctgggattgaggagaaagtg
cttgagtggcagatctcggctcccagtacgttaaactcttggttctcagatgcttccaac
tggtcagaactagtccattctgctgtccgcttcctttctggtgaaggtggaatgtcagca
cttccttccaactttgagccatatgtgagctgcacagagcgaggccagcagtggaagtgg
attggttctggacgggactccgagaaggaagtgactacactgtgtcagctgtggttcgag
gtgaaggatcagatatttcccaaggtacatatatccaacaactggaaggaatctgaggaa
ctcccagacatcatacctccaacacccaggatgagaacggactatgtggtgagacccagc
accggagatgaaaagcgtgtgttccaagagcaggagcgtcagcgatatagtcaaccccac
aaagccttcaccttccgcatgcatggctttgactccgttgtgggacccgtgaagggagta
tttgacaaggatccttctctcaataaggcacgcgaacattctctgctgagatctgataga
ccagcctatgtcacaattctatcactggtacgagatgcagctgctcgtcttccaaacgga
gaggggacacgtgcagagatctgtgagctgctgaaagactcccagtttctcgctcctgag
gtcaccagcgctcagattaacactgttgtgagtggtgctcttgatagactacattatgag
aaagatccgtgtgtgaagtatgatattgggcgcaagttgtggatctatttgcaccgaaac
cggagtgaggaggagttcgaacggattcaccaagcccaggctgcagcagccaaagcgaag
aaggcattgcaacagaaaccgaagctgacaaccaagatcaagtcttctgctaaggagagt
acaacaaagctccctgtctctgagcagtcgctggcatcccaggtgttggcagattccagc
ttacctgtaacacctgtgacccctgtaactccgacattaccagttactcccacatcacca
ccgatatcgactgatggcaacaaagtaccaacaactagtgcaccagaactggtgaaatct
ggtcaaagtgttttgttagtgtcctcgcctacaatgcctcagcttgggaaccttttatct
ggaacacagccaggacaatacaccgggccgcagactccagctcggatcctgtcgcagtct
gttgctgctcctctgccccaggtccgggtagtctctgctcagcaaggcttaacttccact
tcgcatcaaacttctgtcgtacaacaagtccaacaacatcaacatcagatgcggctacca
gcggtcacagcagcagctcacactaaggtactgcctcagtctattctgacggtgccggtg
aaggctcagtctggtgccagtactgtccacatccagcagggctctgcaaaaaccaatctg
acaatggctggaatcagcgctgcttccaaaaccgtgtccagcacattgaacagtaccaca
tccagctcccccagcatcatcatacagagtgtagctggacaaagcatcatgagacaggtt
gctattgcaggccaacttggggtgaagacacagtccagtactggaatcccacttacagca
acaaacatccggactaagggcaaagatgttctgcgattagctccttcctctatcaccact
gactccaagggccagacagtgcttcgaatcacacaggatatgatggctacactgaccaaa
gcaccagttactaccgtgaaactcaccccagacttgctggcaggtaaaggcatttcagcc
actctacacgtcactcctgccatgcagtcaactgactccatggtgaaggcatctaccagc
accacctcttccaccacgtccacagtggtcaaggttacaccagacttaaaagtaactgag
gcaagcagcacagccatccgactgatgcctgcactggctgtaacagtggctgaccagaag
gcgaaggttagtgctcctctgtcttcaacagataccaaaccggcagctaccatcagacta
atgcctggactgggtgtcattcccaaatcaggacaggccattgctgtggcaacgtccagc
aaactgttcactgctgctggtacaatgacttcagctgcagtaactctggcaacagcagga
tcaaaggcaatcactaaagtaacaccaacagctggactgccaatctctataggaacgggc
actgccacagtgaggcaggttcctgtcagtgcaaccatggtgtccacaacacaggcgaca
aagctgcctgcgacaatcactgtgcctttatcagtactaaaccaaccacttaaaggaaaa
ggagtgatggcaggaccaatcatcaaggggaatcttggagcaaatatcagtggacttggc
agaaacatcattctcacgaccatgccagcagggaccaaactaatcgctgggaacaaacct
gtcagctttgtcacagcacagcaactccagcagcttcaacaacaaggacaggctacacag
gtaaggattcagcacttaccagctcagcaacttcaccaaggaacagtcatcagctccacc
aaacctatttccactgttgtcgtgacaaccgcaccatcagtgaagccgtctcaggaccag
tga
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