Hemiscyllium ocellatum (epaulette shark): 132829722
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Entry
132829722 CDS
T09720
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04270
Vascular smooth muscle contraction
hoc04625
C-type lectin receptor signaling pathway
hoc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
132829722
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
132829722
09153 Circulatory system
04270 Vascular smooth muscle contraction
132829722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132829722
Membrane trafficking [BR:
hoc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
132829722
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
PH
Pept_S41_N_bact
DUF8087
Motif
Other DBs
NCBI-GeneID:
132829722
NCBI-ProteinID:
XP_060703076
LinkDB
All DBs
Position
29:56416093..56550768
Genome browser
AA seq
1548 aa
AA seq
DB search
MSVTPSGLSERFPIRRLPRQGSILNKDLSPDKKHDKKNSEKSPLYEFDPTGLVQRCVIIQ
RDENGFGLTVSGDNPVFVQSVKEDGAAVRAGVQQGDRIIKVNGSLVTHSNHVEVVRLIKS
GSYVALTVLGRPPGSPQIPFSATDGDPGAFFFPGQQGALSPNPTFSPYSSSSSCPDRITS
PMPVAEDTLVHNQKVEILRNMLGTEIRQLQQLKEKYVRNPTQQLLRDQQEVEKHIHQLQE
QLSKATGSSQDGSSCVRHSESLSIVERLTDDGGEWEHDLQSQSENMGTDKSQSSLSRAES
TITSPSPPSDGQHYRDSLSNSPKTSPKDAGSFCESMDIDENQDWDSMSPALNSPQIGAQI
IGAEDDDFDTEVEQIDVQCDCFQSIESVKSRPAHLVAFLHHVVSQFDAAPLLCYLYADLY
NHTNPKDHRRVFVEFCHLFLEKGSNLKVQVPEWISTELERKRGDLTEEMQRSYMQGMQAS
VLSDVKTHLEDFRQKRNMGMTIAENELAKLDRERMHDRVSAEQKERLHAEHLLLKIDDVL
MNLSPSEEDRSNSISDVILIYMKHLGVKVKDSRNLDRDRRIRVAFFPKKKPSIKKEKESV
KDDDKKKRFQSILDPIRRTSKQDRSAIEKARLLYQKQMGPYNRSLSHSDHNERTKPSPFF
SEGSDANSQPAAVGLAGSALSTSVHDGVPESDTDPIAAASAALRMAGDNLSIDSNSSIPK
SSFDFPFALDQVMEEDRESERSLETATPPCTPKPGRRMDGHGYGAWTEPTSQSQCLAQTD
EDQMHLSDVEQDPANWQQLVSQDILSGLKPHEIKRQEVINELFNTERAHIRMLKVLDVIF
YQKMMRDGSLPAAEVRSIFSNLDEILQLHISLNEQMRKVWKRNENFVVDQIGEDLLSWFS
CSEEEKFKRAAATFCSNQPFALELIKSKQKKDARFQAIIQEAQSNPQCRRLQLKDIIPTE
MQRLTKYPLLLENIAKNTDPEQHEEKKKVKKAAECCRQILNFVNQAVKEAENKQRLEDYQ
RRLDLSSLKQSDYPLIEEFRNLDLTKRNMIHEGPLTWRVNKDKTIDLYTLLLEDILVLSQ
KQDERLVLKCHSKNLAANADTKHIFSPIIKLSAVLVREVATDNKAFFVISTSTDGAQIYE
LVAQTVSERKTWQYLITQTSGSIKPPSHHVIPEPAVTEGEQEDEENLSTLQQSGSGKVLG
RMFGSSESPQGKEMSSGTEDTLNLSVSSQQKPHVVPSMQGTDEQNRPTMEYASLRRSTDQ
RLPHRNTEPRYSSQGQSSGSLQFYSQAEAALRNLHTLKQLLSFHMLNLDDDGSDGGSFQH
LPEEDSCLTSPKPGADGSLDCTVYYQGETTDKTLQHQVELDNGTLEETETQTSLTERTKL
SRHFMLDAAHGEEHNPDSATDDSGERFYDAPEDHADEHRPQQNCSSPNRDERSKSQARVS
GHYITLDGFPQTEGSSTDETDMSVIQAECSVDYTAQSTEAREDCNVSGPCNPGVEFAQLL
PSLDVQNQILQLIRRIESNLKHLKEVELEYYNQQVLESAVSHEQTRDS
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttacaccgtccggcctgagtgagaggtttcccatcagaagacttcccaggcaa
ggaagtatactgaacaaggatctgtcgcctgataagaagcatgacaaaaagaactctgag
aaatctcctctatatgagtttgacccgacaggcctggttcaacgctgtgtcataatccag
agagatgagaacggatttggcctgacagtcagtggtgataatcctgtatttgtccagtcc
gtcaaagaggatggggcagctgttcgggcaggtgtgcaacagggagacagaattattaag
gttaatggatcactggtgacacactcgaaccatgtagaagtggtccggttaatcaaatct
gggtcatatgtggccctcacagtcttgggtcgtccgcccgggtctccgcagatcccattc
tcggcaaccgatggagatcctggggctttcttctttcctggccaacaaggagcactatcc
ccaaatccaaccttctccccatattcttcaagtagcagctgcccagataggatcaccagc
cccatgcctgtggcggaagacacccttgtacacaatcagaaagttgaaatcctgagaaac
atgctgggcactgagatccggcagctgcagcaacttaaggagaagtatgtgagaaaccca
acacagcaactgcttcgagatcagcaagaagtggagaaacatattcatcaactgcaagag
caactgagcaaagctacaggctcctcacaggatggctcaagttgtgtacgacactcagaa
tcattatcaattgtggaaagactcactgatgatggaggagagtgggaacatgatctgcaa
tcccagagtgagaatatggggacagacaaaagccagagttcattgagccgtgcagagtct
acaataaccagcccatctcccccaagtgatggtcaacattacagggacagtctgagcaac
agtcccaagacctccccaaaagatgctggcagcttctgtgagagtatggacattgatgaa
aaccaggactgggattctatgtccccagcacttaatagtccgcagattggagcacagata
attggagcagaagatgatgattttgacactgaagttgagcagatcgacgttcagtgcgac
tgttttcaatccattgagtcagtgaagtctcggcctgcgcatctcgttgcattcttgcat
catgttgtgtcccagtttgatgcagccccattgctctgttatctttatgccgatctctat
aatcacacgaacccaaaggaccatcggcgagtatttgtggagttctgtcacttgtttctg
gagaagggttcgaatctcaaagttcaagttccagaatggatcagcacagagctggagagg
aagagaggagatctgactgaggaaatgcagcgaagctacatgcagggaatgcaggccagt
gtcctctctgatgttaagacccatctggaagatttcagacaaaagaggaacatgggaatg
actatcgcagagaatgagttggcaaagttagatcgggaacgaatgcatgatcgtgtatca
gcagaacagaaagagcggctgcatgcagagcacttgttattgaagattgatgatgttttg
atgaacttatctccctctgaggaggatcgaagcaattccattagtgatgtgatcctcatc
tacatgaaacacctgggtgtgaaagtgaaggattcaaggaacctggacagagatcgcaga
ataagagttgcattcttcccaaaaaagaagccaagtattaagaaggagaaggagtctgtg
aaagatgatgacaaaaagaaacggttccagagcatcctggatccaattcgtcgtacaagc
aaacaggatcgtagtgccattgaaaaggccaggttactgtaccaaaagcagatgggacca
tacaaccgctcactttcacattctgatcacaatgagagaactaaacccagcccattcttc
agtgaggggagtgatgcaaactctcagcctgcagcagttggactggcagggtcagcattg
agtacctctgtccacgatggggttccggagagtgatacagatcctatagctgcagcatct
gctgcattgaggatggctggtgacaatttgtcaattgacagcaacagttccataccaaag
tcaagctttgattttccatttgccctggatcaggtgatggaggaagaccgggagtcagag
aggagtctggagactgccacgcccccatgtaccccaaaaccaggtcgcagaatggatggt
catggttatggagcttggactgagccgacttctcaaagccagtgcctggctcagacagat
gaagatcaaatgcacctatcagatgtggagcaggacccagctaattggcagcaactggtg
agccaggacatcctgtctggcctgaaaccacatgagatcaaacggcaggaagttattaat
gaacttttcaacactgagcgtgctcacatcagaatgctgaaagttctggatgtaatcttt
taccagaagatgatgcgagatggcagtttacctgcagctgaagtgaggagcatattttcc
aaccttgatgaaattctgcagcttcacatttcgttaaatgagcagatgaggaaagtctgg
aaaaggaatgaaaactttgtggttgatcagattggagaagacctgctgagctggttcagc
tgttcagaagaggagaagtttaaacgagctgctgccactttctgcagtaatcagccattt
gccctggaactcatcaaatcaaaacagaagaaagatgcacgattccaggcgatcattcag
gaggcacagagtaatccacagtgccgaagactgcagttaaaggacatcatcccaactgaa
atgcagagactgacaaaatacccgttgcttctggagaatattgctaaaaacacagatcca
gagcaacatgaagagaaaaagaaggtgaagaaagctgcagaatgttgtaggcagattctg
aattttgtgaatcaggctgtgaaagaagctgagaataaacagcggttggaagattaccag
cgtcgcctggacttgtccagtctaaagcagtcagactatccactgattgaggaatttcgg
aatctggatcttacaaagcggaacatgattcatgaagggcctctaacctggcgagtaaat
aaagacaaaacaatcgatctctacactctgctgttggaggatatcctggtcctgtcccag
aagcaggatgaacgactggtgttgaaatgtcacagtaagaaccttgctgccaatgcagac
acaaaacacatcttcagccccatcatcaagctgtctgctgtgctcgtgcgggaagtcgca
acagataataaggctttctttgtcatctccacatcaactgatggtgcacagatctatgaa
ctggtagcccagacagtctctgaacgaaaaacgtggcagtatttaatcacacagacatca
ggatcaattaaacctccaagccaccatgtgatccctgagccagcagttactgaaggtgag
caagaagacgaggagaatctgagcacgctgcagcaaagtggatcaggcaaagttttggga
agaatgttcggcagcagtgaatctccacaaggtaaagagatgtcatctgggactgaagat
actctgaatctctctgtgtcaagccagcagaaacctcatgtggtcccctctatgcaaggg
acagatgagcagaacagacccacgatggagtacgccagcctccgcagatcaactgatcaa
aggctaccccacagaaacactgagccacgctattcaagccagggtcagtcttcaggctca
ctgcagttctattcccaagcagaggctgcactaagaaaccttcacaccttgaagcaattg
ctctcctttcacatgctgaatttggatgatgatggcagtgatggaggctcatttcagcac
cttccagaggaagacagttgcctgacgtctccaaagccaggggcagatgggtcactggat
tgtacagtgtattatcaaggtgagacaactgacaagactctgcagcatcaggttgagtta
gacaatgggacactggaagaaacagaaactcaaacaagtcttactgaaaggactaaactt
tcccgtcactttatgctggatgcggctcacggtgaagagcacaacccagactctgcaacc
gatgacagcggagaaaggttctatgatgccccagaagatcatgcagatgaacatcggcca
cagcagaactgctccagtcccaacagagatgagaggtcaaagtcgcaagcacgtgtgtca
ggacattacataaccctggatggatttccacagactgaggggagctccactgatgaaact
gacatgtcagtgattcaggctgaatgttcagtggattatactgcccaaagtacagaagca
agggaggattgcaatgttagtggaccgtgtaatccaggcgtggaattcgctcagttactt
ccttcgttggatgtacaaaatcaaatactccaattgatacggagaatagagtccaacctg
aaacatttaaaggaggtggagttggaatattacaatcaacaggtcttggaatcagcagtg
tcacatgagcaaacaagagacagttaa
DBGET
integrated database retrieval system
