Hemiscyllium ocellatum (epaulette shark): 132829794
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Entry
132829794 CDS
T09720
Name
(RefSeq) glutamate receptor ionotropic, kainate 3-like
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04080
Neuroactive ligand-receptor interaction
hoc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132829794
04082 Neuroactive ligand signaling
132829794
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hoc04040
]
132829794
Ion channels [BR:
hoc04040
]
Ligand-gated channels
Glutamate (ionotropic)
132829794
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
132829794
NCBI-ProteinID:
XP_060703141
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All DBs
Position
30:complement(15285216..15769688)
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AA seq
1043 aa
AA seq
DB search
MHRSFFDSDSAECRSAACPLVTDTVPPRLVVSVLYRTKSVCGEREDHVEIARLGESIRSL
TPDTGRVVNLLTQQLPPPRHPLPTAYLLNQTRNPFCVDSGQSGGQKLNTVGSCFKLNSFL
QTCDHQKSLGLSPVLSMVLEYRTGLIFYLFWIQYSHGMPHVIRIGGIFELVEGGTVGAEE
LAFKFAVNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSS
SNAVQSICNALEVPHIQIRWKHHPMDNRDSFYTNFYPDYASLSHAILDLVQFLKWRTATV
VYDDSTGLIRLQELITAPSRYNIRLKIRQLPIDSTDARPLLKEMKRGREFRIIFDCSYTM
AAQILKQAMSMGMMTEYYHYIFTTLDLFALDLDSYRYCGVNMTGFRILNTENPHVASIIE
KWSMERLQASPSADSGLLDGIMTTDAALTYDAVHIVSMSYQRAPQMTVNSLQCHRHKPWR
FGSRFMNFIKEAQWEGLTGRIVFNKSTGLRTDFDLDVISLKEEGLEKVGTWDTVNGLNVT
EISRGRVSNITDSLTNRSLIVTTILEEPYVMFKKSDKPLSGNDRFEGYCIDLLKELSSIL
GFVYDIQLTQDGKYGTPDDKGQWNGMVKELIDHKADLAVAPLTITYAREKVIDFSKPFMT
LGISILYRKSNGTNAGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYDAHPC
NPGSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANL
AAFLTVERMESPIESADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSRQQT
ALVKSNEEGIQRVLGADYAFLMESTTIEYVTQRNCNLTQIGAPMDSKGYGIGTPLGSPYK
EKITIAVLQLQEDGKLHMIKEKWWRGNGCPEEDSKEASALGIQNIGGIFIVLAAGLVLSV
FVAIGEFIYKLRKTAEREQRSLCSTMAQELRLSLTCQRRVKHKPQAPVMVKTEAVINMHT
FNDRRLPGKDNMTCNTGLTPVFP
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcagtttctttgattccgattctgctgagtgcagaagtgccgcttgtcctctt
gtgacagatactgtcccgcccaggctagttgtgtctgtcctttatcgcactaagtcggtg
tgtggagaacgtgaagatcatgttgagattgcacggctcggggaaagcatccgctcgctc
actcctgacactgggagagttgtaaacctcctgacccagcagcttcccccaccccggcac
cccctccccacagcttacctcctcaaccaaacaagaaatccattttgcgtcgactctggg
caaagcggcggacagaagctgaatactgtgggatcttgctttaagctcaactcgttcctt
cagacttgcgaccaccagaaatcgctgggcttgtcccctgttttgagcatggttttggaa
tacaggacgggacttattttttacttgttttggatacaatattctcatgggatgcctcat
gtcattcgtatcggagggatctttgaattagtggaaggtggcacagtgggagcagaagag
ctggccttcaagtttgctgtcaataacatcaacagaaacagaacactgcttccaaatacc
accctgacgtacgatattcaaagaataaatatctacgatagctttgaagcatccagaaaa
gcctgtgatcagctttcattaggagtggttgcaatatttggaccttctcacagctcttca
tccaatgctgtccaatctatctgcaatgcgctggaagtcccacacatccaaatccgatgg
aaacaccatcctatggacaacagagactccttctatactaacttttatcctgactacgcc
tctctcagccacgcaattttggatcttgtgcagtttctgaaatggaggacagcaactgtg
gtttatgatgatagcactggtctcatacggctgcaggagctgataacagctccctccagg
tacaatatccggctaaagattcgtcaacttcccattgactcaaccgatgccaggcctctc
ttgaaggagatgaagcgaggaagagagttccgcattatttttgactgcagctacacaatg
gctgctcagatcctgaaacaagcgatgagtatggggatgatgaccgaatattaccactat
atttttaccacgctggatctcttcgccctcgacttagattcctatcgctactgtggggta
aacatgacaggattccgaattttaaatactgaaaacccacatgtagcttctatcattgaa
aagtggtccatggagcgactccaggcatctcccagtgcagattctggtctacttgatgga
attatgacgacagatgctgctctgacatacgatgcagttcatattgtatcaatgtcctat
cagcgagcgcctcagatgactgttaactctttgcagtgccatagacacaagccctggaga
tttggaagccgcttcatgaacttcataaaagaggctcaatgggaaggattaacaggccga
atcgtatttaacaaaagcactggactgcggactgatttcgatttggatgttatcagtctt
aaggaagaaggcctggaaaaggttgggacctgggacacagtcaatggtttaaatgtcacc
gagatttcgaggggaagagtttctaacataacagactcattgacaaatcggtcactaatt
gtgacaacaatcctggaggaaccatacgtcatgtttaagaagtctgacaagccactctct
ggtaatgaccgatttgaaggatactgcattgatctgctgaaggaattatccagtattctg
ggctttgtttatgatattcaactgacgcaagatggaaagtacggaactccagatgacaag
gggcagtggaatggcatggtgaaggagctcattgatcacaaagctgaccttgctgttgct
ccattgacgatcacctacgcccgtgagaaggtcattgacttttctaaacccttcatgaca
ctggggatcagtattttgtaccgaaaatcaaatggaacaaacgctggtgtcttctccttc
ctgaatcctctctctcccgatatctggatgtatattttattggcatacctcggtgtgagt
tgtgtgctgtttgtcatagccaggttcagcccctatgaatggtacgatgcccatccttgt
aaccctggatctgacgttgtggaaaacaacttcaccctattgaatagcttctggtttgga
gtaggagctctcatgcaacaaggctcggaactgatgccaaaagccctgtccaccagaata
atcggtggcatctggtggtttttcaccctcataattatctcatcctacacggcgaacctg
gctgctttcctaactgttgaacgcatggaatcccccatagagtcagctgatgacctggcg
aaacaaaccaaaatagaatacggggcagttaaagatggagccaccatgacttttttcaag
aaatcaaaaatttccacttttgagaagatgtgggcttttatgagcagcaggcagcaaaca
gcactcgttaaatcaaacgaggaaggaatccaacgagttcttggtgctgattatgccttc
ctaatggaatctaccaccattgagtatgtcactcaaaggaattgcaacctgacccagatt
ggagcacctatggattcgaaaggctatggtatcggaacaccacttgggtcaccatataag
gaaaagataaccattgctgtcctgcagcttcaagaggacggcaagctgcacatgataaaa
gagaaatggtggcgaggcaacggctgccctgaggaagatagcaaagaggccagcgccctg
gggattcaaaacattggtggcatcttcattgtgttagcagcaggcctagtgctctcagtg
tttgtggcaataggagaatttatttataaattacgaaaaactgcagaacgtgaacagaga
tccttatgcagcaccatggcccaggaacttcggttatctctcacatgccagcggcgggtg
aaacataagcctcaggcgccagtcatggtgaagacagaggcggtgatcaacatgcacacg
ttcaatgaccgacgactgcccgggaaggacaacatgacctgcaacaccgggctgactcca
gtgtttccctag
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