Hemiscyllium ocellatum (epaulette shark): 132829888
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Entry
132829888 CDS
T09720
Name
(RefSeq) vimentin-like
KO
K07606
vimentin
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132829888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132829888
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hoc04812
]
132829888
04147 Exosome [BR:
hoc04147
]
132829888
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
132829888
Cytoskeleton proteins [BR:
hoc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
132829888
Exosome [BR:
hoc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132829888
Exosomal proteins of other cancer cells
132829888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Tropomyosin
DUF1664
Laminin_II
HD-CE
Fez1
Tup_N
RNAseD_HRDC_C
Fib_alpha
Phage_GP20
Baculo_PEP_C
DUF724
DUF6907
FPP
Motif
Other DBs
NCBI-GeneID:
132829888
NCBI-ProteinID:
XP_060703281
LinkDB
All DBs
Position
2:complement(11816992..11831847)
Genome browser
AA seq
383 aa
AA seq
DB search
MRSSSYSQKTASMSWSSRSGPRLRVPSPAPPEARASEKEEMQQLNSCLASYIDKVRGLEQ
RNSQLREELAGLKAQLKVPQGIGDEYQQQFKELKELIEQLTHEKGLAEIEMGNTKEEVDL
WTVKCQEQLDLQDEAERILREFQKDVDDASFQKTGLERTIEQLVAEIDFLRKLHEDEVAD
LVRQIEESKVSVELDSTRPDLRAALRSMRAQMEEISAKNLKEAEVWYKTKFDSLRQHATK
YDIQIQSTKDELSILQQQAVDLESEIGTMRSTIQYLENQLEGMEASHLEKVAGLQGLITQ
LEFQLRETKTEMAQYLQEYQQLLNVKLTLDAEITTYRKLLEAEEDRLGLLSENSAGISPV
TREGKGESVPANIETHTAHEVIA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaggagctcctcgtacagccagaagaccgcatccatgagctggtccagcaggagtggc
ccgaggctccgggtcccctccccggcacccccagaggcccgagcatccgagaaggaggag
atgcaacaactcaacagctgcctggccagctacattgacaaggtgaggggcctggagcag
cgcaactcccaactgagggaagagctagcaggcctgaaggcccagctcaaggtgccccag
ggaataggggacgagtatcaacagcagtttaaggagctcaaggagctgattgagcaactc
acccatgagaaagggctggccgagatcgagatgggcaacaccaaggaggaggttgatctc
tggacggtgaaatgtcaagagcagcttgaccttcaagatgaagcggagaggatcctgagg
gagttccagaaggatgtggatgatgccagttttcaaaaaactggcctggagagaaccatt
gagcagctcgtggcagagattgacttcctgagaaagttgcacgaggacgaagtggctgat
ctggtccgacaaatcgaagagtccaaagtctcggtggaactggactcaacccgtcctgat
ctgagagctgccttgcgttccatgcgggcgcaaatggaagagatttctgccaaaaacctc
aaggaagctgaggtttggtacaagaccaagtttgacagcctccggcagcacgccaccaaa
tacgacatccagatccagagcacgaaggatgagctcagcatcttgcagcagcaggcggtg
gatttggagagtgagatcgggaccatgaggagtaccatccagtacctggagaaccagcta
gagggcatggaggccagccacctagagaaggtcgcaggtctgcaaggcctcatcacccaa
ctggaattccaactgagagaaactaaaacagagatggcacaatatcttcaggaataccag
caactgctcaatgtcaagctgacactggacgctgagatcactacctaccggaagctgctg
gaagcagaagaggacaggctgggattattaagtgagaactctgcaggtatttcccctgtt
acaagagaggggaaaggagaatccgtccctgctaacatagaaacacatacagctcacgaa
gtgattgcctag
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