Hemiscyllium ocellatum (epaulette shark): 132829938
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Entry
132829938 CDS
T09720
Name
(RefSeq) syndecan-3-like
KO
K16337
syndecan 3
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04514
Cell adhesion molecules
hoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132829938
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132829938
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hoc00535
]
132829938
Proteoglycans [BR:
hoc00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
132829938
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
Herpes_UL87
DUF1993
Motif
Other DBs
NCBI-GeneID:
132829938
NCBI-ProteinID:
XP_060703346
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Position
30:complement(46924254..47147339)
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AA seq
379 aa
AA seq
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MGRLPVLCLCLCLFSSSLCHIGMTYHTSRQTQDLATLTDLEGSGSDDEDENVYSGSGGSG
YFEFDTELRFTTSMARPVTSPPSTTSFGSLQPIAFTSLAGGSTASSPTPSASTLTRAATS
TMAPVPITMPAAASTTTLLATTTSASTTASAITTSTVAMPTARTIAIVPLATAAATTVQS
ITRSATRVSEVARPASTADVHTSQASLASFTESTQKTLSHVPYITEHTQKDDSSEIVKVT
TVNNEVEAPAAGGPSGDFEITEEGEVINPEANNEVFAVVTQPTGRGTGKKGLPNDIDNAI
DSGSSSSAAQLPQKNILERKEVLVAVVVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEE
PKQASIAYQKPDKQEEFYA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgggcagactcccagtgctctgcctctgtctctgcctcttcagctccagcctgtgtcac
attggaatgacctaccacacatcccgacagacacaagatctggcaacgttaacagatctc
gaaggatcagggtcagatgatgaggatgaaaatgtctactctggttctggaggatcaggc
tactttgagtttgacactgagctgcggtttaccaccagcatggccaggccggttacctct
ccgccatccaccacatccttcggctcgcttcagccgattgccttcacttccctggcgggc
ggcagcacggccagttcacccacaccgtccgcctccactctcaccagggcagcaacctcg
acaatggcgccagtccccatcaccatgccagctgctgcctccaccacaactctcctggca
acgaccacaagcgcctcgacaaccgccagcgccatcaccaccagcactgtcgccatgccg
actgcccgtaccatcgccattgtgccactcgctactgcagcagcaaccacagtgcagtca
atcacaaggagtgccaccagagttagtgaggtggccagaccagcatcgacagcagatgta
cacacaagccaagcttcattggcaagcttcacagagagcactcagaaaaccctctcacat
gtcccttacatcacagagcacacacagaaagatgactccagtgaaatagtcaaagtgacg
actgtcaacaatgaggtggaggctcctgctgcaggaggtccgagtggagactttgaaatc
accgaggaaggagaagtgatcaatccagaggcaaataatgaagtgtttgctgtcgtcaca
caaccaaccgggaggggcactgggaagaaaggcctccccaatgacatagacaatgcaata
gattcggggagctcatcttcagctgcacagttaccccagaaaaacatactggagaggaaa
gaggtgttagtagcggttgttgtcgggggggtagttggagcactctttgctgccttcctg
gtcatgctgctgatctatcgaatgaaaaaaaaggacgagggaagctacacattggaagag
ccgaagcaggcgagcatagcttaccaaaaacctgacaaacaggaggagttttatgcataa
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