Hemiscyllium ocellatum (epaulette shark): 132829979
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Entry
132829979 CDS
T09720
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04020
Calcium signaling pathway
hoc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
132829979 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132829979 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
hoc04030
]
132829979 (ptafr)
G protein-coupled receptors [BR:
hoc04030
]
Rhodopsin family
Others
Platelet activating factor
132829979 (ptafr)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Str
CitMHS
Tegument_dsDNA
Motif
Other DBs
NCBI-GeneID:
132829979
NCBI-ProteinID:
XP_060703403
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All DBs
Position
30:complement(42370531..42398964)
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AA seq
354 aa
AA seq
DB search
MCSFDNNISCATVIGLAYNSNTSCDIDAEFRYILFPIVYSLVFVLGLVGNCYVLWVFNRM
SPANSMTEIKIFMVNLSVADLLFILTLPFWVVYYSTKGHWIFREIPCRVAGCLFFINTYC
SIVFLAVISYNRYCAVAHPIETVQKNGRKRGIIISTIIWTVIIVSAAPFLFQDGTNDVNG
VIRCFEGYDKNSALPVVIIHFILIGAFFIAFLIIIICNLLILNLLSTKAAQPSRSEKVKK
QAFRMVCAVITVFCICFLPHHLVHGPWTLTVLGLWRAEDCVFRRAVNDAHQITLCLMGLN
CILDPIIYCFLTKKFRRFLTQRLSKWKSTRKSIRTISTETNIDGDIALHNMCNS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcatttgacaataacatctcatgtgccactgtcattggccttgcttacaacagc
aacacaagctgtgacattgatgctgaattcagatacatactgtttcctattgtctatagt
ctcgtcttcgtcctaggactcgttgggaactgctatgtgctgtgggtgtttaaccggatg
tctcctgcaaacagcatgaccgagattaaaatcttcatggtgaatctgagtgtggctgac
ctcctgtttatcttgacgcttcctttttgggtcgtgtactacagtactaaaggacactgg
atctttagagagatcccctgcagagtggctggctgtctattttttatcaatacctactgc
tccattgtgtttctagcagtgatcagttataacagatactgcgctgtggcacaccccatc
gagacagttcagaaaaatggcaggaagagaggcattattatatcaacaattatctggact
gtaatcattgtcagtgcagcccccttccttttccaagatggaaccaacgatgttaatggt
gtcattcgttgcttcgaaggatatgataagaattcagccttgcctgtggtcatcatccac
tttatcttgattggagctttcttcattgcctttcttataataatcatctgcaacttgctc
atcctaaacctgctatcgacaaaagcagcccagccgagcaggagtgagaaggtaaagaag
caagctttccgcatggtgtgtgctgtcatcaccgtgttctgcatctgctttctcccccat
catctggtccacggcccctggaccctcactgtcctgggactgtggcgggcagaggactgt
gtgttcaggcgggcagtgaatgatgcacaccaaatcacgttgtgtttgatgggtctgaac
tgcattctggatcctatcatatattgctttctgaccaagaagttcaggagatttttgaca
caacgtctgagtaaatggaaaagtaccaggaagagcattaggaccatttccacagaaacc
aatatagatggagacatagctttacataacatgtgcaactcatga
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