Hemiscyllium ocellatum (epaulette shark): 132830043
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Entry
132830043 CDS
T09720
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03082
ATP-dependent chromatin remodeling
hoc03083
Polycomb repressive complex
hoc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132830043
03083 Polycomb repressive complex
132830043
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
132830043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hoc03036
]
132830043
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
132830043
Histone modification proteins
HAT complexes
HATB complex
132830043
HDAC complexes
Sin3A-HDAC complex
132830043
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
132830043
PRC2.2
132830043
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
132830043
Heterochromatin formation proteins
Other heterochromatin formation proteins
132830043
Chromatin remodeling factors
NuRD complex
132830043
NuRF complex
132830043
NuRF complex (fruit fly)
132830043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
132830043
NCBI-ProteinID:
XP_060703487
LinkDB
All DBs
Position
30:complement(55281745..55359396)
Genome browser
AA seq
484 aa
AA seq
DB search
MTDKEASDAHYDVTPVTSHTHCSSLLTAASPVQSTHLDTTPAICHEWKRGKKTAFDDAVE
ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKDYSVHRLVLGTHTS
DEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM
PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNPNLSGHL
LSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM
IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF
ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH
TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAPDPEGLPKMHQFQTGH
FQLT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaaagaagcatcagatgcccattatgatgttacacctgtgacgtcacacacc
cactgttcttcattactgacggccgcctcacctgtgcagtccactcatctcgacacgacg
ccagccatttgtcatgaatggaaacgaggaaaaaaaacagcctttgatgatgccgtggaa
gaacgtgtcattaatgaagaatacaagatctggaagaaaaatactccctttttgtatgac
ctggtaatgacgcatgctctggaatggccaagcctgactgcacagtggttgcctgacgtt
tctagacctgagggaaaggactacagtgttcatagactggtgctgggaacccacacatct
gatgagcaaaaccatttggtcatagccagtgttcaactgccaaatgatgatgcgcagttt
gatgcttcacattacgatagtgagaaaggagaatttggtggatttggttctgttagtgga
aagatagagattgaaataaaaataaaccacgaaggggaagtaaatcgtgctcgttacatg
cctcagaatccttgcattattgctactaagactccctccagtgatgtgttggtctttgat
tatacgaaacatccttccaaaccagatccctctggtgagtgcagtccagatcttcggtta
cgtgggcaccagaaagaaggctatgggctctcatggaatccgaatctaagtggccatcta
cttagcgcttcagatgatcatactatctgcttatgggatattagtgcggtacctaaagaa
ggaaaaatagttgatgcgaaaactatctttactggtcatacagcagtagtagaagatgtg
tcatggcacttgctgcatgagtcactgtttggttcagtggcagatgatcagaaactaatg
atctgggatacaagatctaacaatacatctaagccaagtcactccgttgatgcacataca
gcagaagtgaactgtctctcattcaatccttacagtgaatttatcttagcaactggttct
gctgataagactgtagcattgtgggatttaagaaacctgaaactaaagttacattccttt
gagtcacacaaggatgaaattttccaggttcagtggtctcctcataacgaaacaatcctg
gcatcaagtggaacagatcgcagactaaatgtgtgggatttgagtaaaattggagaagaa
cagtcacctgaagatgccgaagatggtcctccagaactgttgtttattcatggtggtcac
acagctaagatctcagatttttcttggaatccaaatgaaccatgggtaatttgctctgta
tctgaagacaatatcatgcaagtttggcagatggctgaaaatatttacaatgatgaagat
cctgagggagctcctgatccggaaggcctaccaaagatgcatcaatttcagactgggcat
tttcaattaacttga
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