KEGG   Hemiscyllium ocellatum (epaulette shark): 132830117
Entry
132830117         CDS       T09720                                 
Symbol
hdac1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03082  ATP-dependent chromatin remodeling
hoc03083  Polycomb repressive complex
hoc04110  Cell cycle
hoc04330  Notch signaling pathway
hoc04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    132830117 (hdac1)
   03083 Polycomb repressive complex
    132830117 (hdac1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    132830117 (hdac1)
   04350 TGF-beta signaling pathway
    132830117 (hdac1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    132830117 (hdac1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hoc03036]
    132830117 (hdac1)
Enzymes [BR:hoc01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     132830117 (hdac1)
Chromosome and associated proteins [BR:hoc03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     132830117 (hdac1)
   HDAC complexes
    Sin3A-HDAC complex
     132830117 (hdac1)
    BRAF-HDAC complex
     132830117 (hdac1)
    REST complex
     132830117 (hdac1)
    SHIP complex
     132830117 (hdac1)
    MiDAC complex
     132830117 (hdac1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     132830117 (hdac1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    132830117 (hdac1)
  Chromatin remodeling factors
   NuRD complex
    132830117 (hdac1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 132830117
NCBI-ProteinID: XP_060703592
LinkDB
Position
30:53615551..53645426
AA seq 488 aa
MALAQGGGKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
SAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEA
IFKPIICKVMEMYQPSAIALQCGADSLSGDRLGCFNLTIKGHAKCVEFVKTFNLPLLMLG
GGGYTIRNVARCWTYETSVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVPEDSGDEEEEDADKRISIRASDKRIACDEE
FSDSEDEGEGGRRNTANYKKLKRAKVEEEKEGEEKKTDGKEEEKAKDGVPEKLETKGIKV
EETKPSNA
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgctggcccagggcggcggcaagaagaaggtctgctattactatgacggtgatgtt
gggaattactactatggccagggccatccaatgaaaccccacagaattcgaatgactcat
aacctgcttctaaactatggcttgtacagaaaaatggaaatctatcgtccacacaaagcc
tcagctgaagaaatgacaaagtaccacagtgatgattacatcaagtttctgcggtccatc
cgtccagacaatatgtctgaatacagcaagcagatgcagagatttaatgtgggtgaagac
tgtcctgtatttgatgggctgtttgaattctgccagctttcgactggagggtcggttgct
ggagctgttaaattgaacaaacagcaaacagacattgctgtcaactgggccggtggactt
caccatgcaaagaaatcggaagcatcaggcttttgttacgtgaatgatattgtcttggcc
attctcgaattactgaagtatcatcagagagtactgtacattgatattgatattcaccat
ggtgatggtgttgaagaggctttttacacaacagacagagtgatgactgtttcattccat
aaatacggtgaatacttccctggcactggagatctccgggatataggtgcaggcaaaggc
aagtactatgctgtaaatttcccattgagagatggaattgatgacgaatcttatgaagcc
atattcaaacctattatatgtaaggtgatggaaatgtaccagcccagtgccattgctttg
caatgtggtgctgattctttgtctggggatagacttggctgctttaacctcactattaaa
ggccatgctaaatgtgttgaatttgtgaagacctttaatctgcctttattgatgttggga
ggtggaggatacacaattcgtaatgtagctcgatgctggacatatgagacttctgtagct
ttggactcagagattccaaatgaactgccatacaatgattattttgagtactttggacca
gattttaagctgcacattagtccttccaatatgacaaatcagaacaccaatgaatacctg
gaaaagataaagcaacgtttgtttgaaaatctccgtatgctgccccatgcaccaggtgtt
cagatgcaagctatcccagaggatgcggttccagaggacagtggggatgaggaggaggaa
gatgcagacaaacgcatttcaatccgtgcttcagacaagagaatagcttgtgatgaagag
ttttcagattccgaagatgaaggggaaggagggcgacgaaacactgcaaattacaagaaa
ctaaaacgtgccaaagtggaagaagaaaaagagggagaggagaaaaaaacagatgggaaa
gaggaagaaaaggccaaagatggtgttccagagaaattagaaactaaaggaattaaggtg
gaagagacaaaaccaagcaatgcataa

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