Hemiscyllium ocellatum (epaulette shark): 132830302
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Entry
132830302 CDS
T09720
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hoc03009
]
132830302 (ddx52)
Enzymes [BR:
hoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132830302 (ddx52)
Ribosome biogenesis [BR:
hoc03009
]
Eukaryotic type
90S particles
Helicases
132830302 (ddx52)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
132830302
NCBI-ProteinID:
XP_060703871
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Position
31:16982293..17018703
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AA seq
627 aa
AA seq
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MAMEALDLFRALGAGARFDWKRFGKDAERLRVMNSSSTILSENVPDLDFFNSHHAKNCKA
VVSVLKSNGEEKESTADCKDDMCVSPGKRKLEMGSSEKQKRNKVTNAMSDTFSNTKDDDD
DDGIMLMSSLGRKTKNSIDRIDTERSAEKLEHQRREKINQLRRKHRIHVDGTDVPEPVAT
FEQLLQEYNVHPKIIQNIQKAGFQSPTPIQMQAIPVMLHNREILACAPTGSGKTLAFCIP
LLTCLKQPMNKGFRALILSPTRELASQTHRELVKLSEGIGFRIHMINKAAEAAKKFGPKT
SNKFDILVTTPNRLIYLLNQDPPALDLSRVEWLVVDESDKLFEDGKSGFRDQLAAIFLAC
TSHSVRRAMFSATFAFDVEQWCKLNLDNVISVSIGTRNTAVETVEQELLFVGTETGKLVA
MRDLVKKGFSPPVLVFVQSIERAKELFHELIYEGINVEVIHAERTQQQRDNVVCSFRAGK
IWVLICTALLARGIDFKGVNLVINYDFPTTAVEYIHRIGRTGRAGHRGKSITFFTEDDKP
LLRSIANVIKQAGCPVPDYMMQINKLKSKQKKRLIKNPIKRADIKTTPKYFIEKAARTKK
MIQKSKKKGKSHARVPAAKAEQVTTES
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggaggctctcgatctgttccgggcgctgggcgcgggggcccgctttgattgg
aaacgcttcgggaaggacgccgagaggctgcgggtaatgaattcaagcagcaccatcttg
agtgaaaatgttcctgaccttgacttttttaacagtcaccatgctaaaaactgcaaagca
gtggtcagtgtgttgaaaagcaatggggaggaaaaagagtctacagcagactgcaaggac
gacatgtgtgtatccccaggaaaaagaaaattggagatgggtagttcagaaaagcagaaa
aggaacaaagtgaccaatgcaatgtctgacactttttccaataccaaagatgatgatgat
gatgatggaataatgttgatgtcctcactgggaaggaagaccaagaatagtattgacagg
atagacacggagcgcagtgctgagaaactggaacatcaacgacgagaaaagataaatcaa
ctccggcgtaagcatcgcattcatgtggatggaacagatgttcctgaacctgttgcaacc
tttgaacagctcttacaggagtataacgtgcacccaaaaattattcagaacatacagaaa
gctggtttccaatcacccacccccatacagatgcaagccattcctgtaatgctacataat
cgtgaaatcctggcctgtgccccaactggatcgggaaagacattggccttttgcattcca
cttttgacttgtctaaaacaaccaatgaacaagggtttcagggccctgatactgtctcct
actcgtgagcttgccagccagactcatcgggagctagtaaagctctctgaaggtattgga
ttcagaattcacatgatcaacaaagcagctgaggctgccaaaaagtttggtcccaagacg
tcaaataaatttgatattttggtgactactccaaatagactgatttatttgttaaatcag
gatcctcccgctctggacctcagcagggtggagtggctggttgttgatgaatctgataag
ttatttgaagatggcaaatctggattccgagatcagctcgccgctatcttcttggcatgt
acatctcacagtgtccggcgagccatgtttagtgccacatttgcatttgatgttgagcag
tggtgcaaactgaacttggacaacgtgatatctgtgtcgattggtacaaggaataccgct
gtggagacagtggagcaagagttactttttgtgggtacggaaactggaaaactagtagcg
atgagagatctggttaaaaaggggttttcacctccagtgctagttttcgttcagtctatt
gaaagagcaaaagaactctttcatgagttgatctacgagggcattaacgttgaggttatc
catgcagaaagaacacaacagcagagagataatgtagtatgcagcttcagagccggaaaa
atttgggtcctcatttgtacagcgctcctggctcgtggtattgattttaaaggagtgaat
ctagtcattaattacgactttccaactactgctgtggagtacattcatagaattggacgg
actggaagagctggtcatcgaggaaagtctattacatttttcacagaagatgataagcca
cttttacggagtatagcaaacgttatcaaacaagctggttgccctgtaccagactatatg
atgcaaataaacaaactgaaaagtaaacaaaagaaaaggttgatcaaaaatccaatcaaa
cgagcagatatcaagaccacaccaaagtactttattgaaaaggctgccaggacgaaaaaa
atgatacagaagagcaagaaaaaagggaaatcccatgcacgtgtgccggctgccaaggct
gaacaggttaccactgaaagctaa
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