Hemiscyllium ocellatum (epaulette shark): 132830368
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Entry
132830368 CDS
T09720
Name
(RefSeq) TATA-binding protein-associated factor 2N-like isoform X1
KO
K14651
transcription initiation factor TFIID subunit 15
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132830368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132830368
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132830368
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132830368
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132830368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
132830368
NCBI-ProteinID:
XP_060703999
LinkDB
All DBs
Position
31:45934332..45959309
Genome browser
AA seq
423 aa
AA seq
DB search
MSDYGNYSQPGAQAQSYGAYGAQSSQSYGHASQGYGGYEQSGTSGYGQSQSGYGSSYGQG
QGQGQSGMNSSPSSTGYRQGGHSYGSESSHNTYGQQPSYGNYGQHSDSPSSYGSKSETQY
STQQSQSSYSHSTSYHPPHDNYGQQSSGDDYEHDRPGRSKFSDDNRNFGRPQGNGGRGRG
GYGHGGFDCDGRGGRGRMGGGDRGGFNNFGGSRDRGQGPNPASDDNSDNNTIFVQGLGDD
VTTEQVADFFKQIGVIKINKKTGNAMINLYTDKVTGKLKGEATVSFDDPPSAKAAIDWFD
GKDFHGNIIKVSFATRRSEFVRGGRGGRGGQMGRGRGFQGGGGPRGEDWTCPNPSCGNVN
FAWRNECNQCKTPRSDGGEHHGRGGFRGRGGFRGGRGGDRGFGSGKMGGGRSDHRSDRRD
RPY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattatggaaattacagtcagcctggagctcaagcacaaagctatggagcctat
ggtgcccaatcaagccaaagttatgggcatgcttcgcagggttatggtggatatgagcaa
tctggtacttctggatatggacaaagccaaagtgggtatggttcaagttatggacaagga
caaggacaaggacagtcagggatgaactcatctccgtcgtcaacaggctatcgacagggt
ggacacagctatgggagtgagagctcccacaatacttatggacagcaaccgtcgtatgga
aattacgggcagcattcagattcccctagcagctatggctcaaagtctgagacacaatat
agtacccagcaaagccaatcaagttacagccactcaacttcgtatcatccacctcatgac
aattatggtcaacagagctcaggagatgactatgagcacgataggcctggcaggagtaaa
ttcagtgatgacaaccggaactttggcagaccgcagggtaatggaggtagaggtcgtgga
ggatatggtcatggtggctttgactgtgatggtagagggggacgtggtagaatgggtggt
ggtgatcgtggtggcttcaataattttggtggctcgagagatcgtgggcaagggcctaat
cccgcttctgacgacaactctgataacaacaccatttttgtccagggtcttggagatgat
gtgacaactgaacaagttgctgatttctttaaacagatcggtgtgattaagataaataag
aaaactggaaatgccatgatcaacctctatactgacaaagttacaggcaaactaaaaggt
gaagcaacagtgtcttttgatgacccgccatcagcaaaagctgcaattgattggtttgat
ggaaaggatttccatggaaacataataaaagtttccttcgcgactagacgatcagagttt
gtacgaggtggtagaggtggtcgtggaggtcagatgggcagaggtcgtggctttcaaggt
ggtggtggtccaagaggtgaagattggacttgcccaaatccatcatgtggtaatgtcaac
tttgcttggagaaatgaatgtaaccagtgcaaaactcctagatctgatggtggtgaacat
catggaagaggtggctttagaggtcgtggtggattccgtggtggcagaggtggagatcgt
ggcttcggctctggtaaaatgggaggcggaagaagtgatcacagatcagatcgacgtgac
aggccttactga
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