Hemiscyllium ocellatum (epaulette shark): 132830562
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Entry
132830562 CDS
T09720
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03030
DNA replication
hoc03410
Base excision repair
hoc03420
Nucleotide excision repair
hoc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132830562 (rfc2)
03410 Base excision repair
132830562 (rfc2)
03420 Nucleotide excision repair
132830562 (rfc2)
03430 Mismatch repair
132830562 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoc03032
]
132830562 (rfc2)
03036 Chromosome and associated proteins [BR:
hoc03036
]
132830562 (rfc2)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132830562 (rfc2)
DNA replication proteins [BR:
hoc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132830562 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
132830562 (rfc2)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
132830562 (rfc2)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132830562 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
132830562 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_14
AAA_16
Mg_chelatase
Viral_helicase1
AAA_24
AAA_11
Rad17
AAA_assoc_2
RuvB_N
DNAX_ATPase_lid
nSTAND3
MipZ
AAA_19
DEAD
AAA_18
ABC_tran
AAA_5
AAA_28
AAA_25
AMP-binding_C_3
NTPase_1
AAA_23
AAA_30
SLFN-g3_helicase
RNA_helicase
MeaB
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
132830562
NCBI-ProteinID:
XP_060704337
LinkDB
All DBs
Position
31:49278021..49325263
Genome browser
AA seq
367 aa
AA seq
DB search
METGPEAERGLGPGHDTAEGEIREQKGDKEASASTSSAAGRTALAAYELPWVEKYRPLKL
NEVVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNA
SNDRGIDVVRNKIKMFAQQKVTLPKSRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRF
ALACNASDKIIEPIQSRCAVLRYTKLTDAQILARLMQVVEKENVQYTDDGLEAIIFTAQG
DMRQALNNLQSTHSGFGFVNSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKVVAHLWK
LGYSPEDIIGNIFRVCKTFQMQEYLKLEFIKEIGYTHMRIAEGVNSLLQMAGLLARLCQK
TAAPPAS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggagacggggccggaggctgagcgcggcctgggcccgggccacgacacggcggagggt
gagatccgggagcagaagggagacaaagaggcttcggcatccacttccagtgctgccggg
cgaacggcgctggctgcatatgaactgccctgggttgagaaatacagaccactgaaactc
aatgaagttgtgggcaatgaggaaactgtcagcaggttggaggtgttcgcaagggaggga
aatgtacccaacatcataattgcaggtccacctggcactggaaaaaccacgagcatcctg
tgcttagcacgtgcattgttgggacctgcactgaaagatgctgttcttgagctcaatgcc
tcaaatgaccgaggtattgatgtggtcagaaacaaaatcaaaatgttcgcccagcagaag
gtcacactgccaaaaagtcgtcacaaaatcattatcctggatgaagctgacagtatgaca
gatggagctcaacaagccctaaggaggacaatggagatttactctaaaacaactcgcttt
gcactggcatgcaacgcttcagacaaaatcatagaacctatccagtctcgctgtgctgtc
ctgcgttacacaaaactcactgatgctcagattctggctcgactgatgcaggtggttgag
aaggagaatgtccagtatacagatgatggactggaagccataattttcacagcgcaagga
gacatgagacaggctttgaacaacttgcagtcgacacactctggatttgggtttgttaac
agtgaaaatgttttcaaggtctgtgatgaacctcatccacttctggtaaaagagatgatt
caacactgtgtcaatgcaaacatcgatgaggcatacaaggttgttgctcatctctggaaa
ctgggttactcaccagaagacattattggcaacatcttccgtgtctgtaaaacctttcaa
atgcaagagtacttgaagctggagttcataaaggagattggatacactcatatgcgaatt
gctgaaggggtgaattccttattacaaatggctgggctgcttgctcgactttgccaaaag
actgcggctccgccagcaagttga
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