Hemiscyllium ocellatum (epaulette shark): 132830713
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Entry
132830713 CDS
T09720
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04510
Focal adhesion
hoc04512
ECM-receptor interaction
hoc04514
Cell adhesion molecules
hoc04810
Regulation of actin cytoskeleton
hoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132830713
04514 Cell adhesion molecules
132830713
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132830713
09142 Cell motility
04820 Cytoskeleton in muscle cells
132830713
04810 Regulation of actin cytoskeleton
132830713
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hoc04515
]
132830713
Cell adhesion molecules [BR:
hoc04515
]
Integrins
Integrin alpha subunits
132830713
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GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
DUF11
PH1_SSRP1-like
Motif
Other DBs
NCBI-GeneID:
132830713
NCBI-ProteinID:
XP_060704519
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All DBs
Position
32:complement(18333637..18492441)
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AA seq
1064 aa
AA seq
DB search
MIKHLVNFYFSLAVFDLDAKVWKMHACYLMEILSVYLLGLLHLHAFNFDAENPIIYSGPE
GSFFGFSVEFYLPDGGNPGVLIGAPKANTTQENIIEGGAVFLCPWSSNGSHCNIIPFDTE
GDRHIHSVIEDIKEYKSHQWFGATVKSLKDQVLACAPLYHWKYSRTINSKVETGGVTPVG
TCLIAVQNFRSYAEYSPCRSDILQWQFNISNIADKRFCEAGWSSVITEAGDILLGAPGSY
FWQGQLFATSNIDMIVKNYQRDQPLRSLGLTKETKDARGRKDNHFEGYSLAMGEFTGDSV
KDYLLGAPRAKHALGSIVIIDSVTMMSKQTIAGEQVAAYFGYVVAATDINSDGRDDILVG
APLFMNLGQDGKQREVGRVYVYLQDQLENFKQPTQTITGTDKFGRFGSAITILGDLDSDG
YKDVAIGAPYAGEDGNGRVFIYLGHANGLLSKSYQELKGTWAPGLVSAGFGFSLQGGADI
DANNYTDLIVGAHDVDKVLLYRARPVITANAHIILVPDILNPEEKKCVLSQKSTLVTCLE
VRVCVMVKGHDIGQFVLNGQIELDKNKQRSQRRILFLQSYQAQKNFQFSLMRNKQAACQN
FTAYLRQETEFKDKLSPIVVTVNCSLSEEQQLDSGKLKPVLSPRSQTWVTKKTRILLDCG
DDGICIPDLKLNATVDKTHLIAGDSNPLTVTITAVNNGEGAYETELHIPILPQVDFNKVV
QDSKGTTKLSCNVQAENATKTLICDLGNPMKSGAQISARFHFMVHNLDQVENITLSMQIK
SKNIQNSSSEEIYLTFPVQVVTQIYLTGASLPENIVLPYVDLESPADLEVKNESLPMIQH
TYELHNNGPSAISDAVLEIDWPAAFLGNSLLFKSKIIPWGQIKCTVKASNAENWIETMST
MSPLSVTTENSRHNINKRDVSKVENTTEEIIFNLTCTTVICVKIMCRVGLLEKEKRAVVN
INSQLRMEFFVQNRNKQFTFQSKASYIVQEVPYKVQPVEFPSNNTMVVTQIGRSGPEVVL
PIPVWCIIVAVLGGLLLVTLMVFILWKCGFFKRKLPPTEREELL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacacttagtcaacttctatttttctttagctgtgtttgatttggatgcaaag
gtctggaaaatgcatgcttgctatttaatggaaattttgtccgtttatctgcttggacta
ttacaccttcatgcattcaattttgatgcagaaaacccaatcatttattcggggcctgaa
ggaagtttttttggattttctgtcgagttctacttgccagatggtgggaatccaggtgtg
ctgattggtgcccccaaggcaaatactacacaagaaaacataatagaaggtggagcagtg
tttctctgtccttggtcaagtaatggaagtcactgcaacataataccattcgacacggag
ggtgaccgacatattcacagtgtcatagaagacataaaagagtacaaatcccaccaatgg
tttggggctacagttaaatcactcaaggaccaagttttggcctgtgctcccctgtaccac
tggaaatattcacggaccatcaactccaaggtcgagactggtggagtgacgccagtgggc
acgtgtctaatagcagttcaaaacttcaggagctacgcagaatattcaccctgtcgttcc
gatattttgcaatggcagtttaatatatcaaacatcgcagataagcgtttttgtgaggcc
ggctggagcagtgtaatcacggaggcaggagacatactacttggtgcacctggcagctac
ttctggcaaggtcagttatttgctaccagcaacattgacatgattgtcaagaattaccaa
cgtgatcagcctctgagatcactaggattaacgaaagaaacaaaagatgccagagggaga
aaagataaccattttgaaggttactcactcgctatgggggagtttacaggagactctgtt
aaagattatcttctgggagctcccagggcaaaacacgcattgggatcgatcgttattata
gattctgtgaccatgatgagcaaacaaactattgctggcgaacaggtagctgcgtacttc
ggctatgtggtggctgccacagatataaacagtgatgggagagacgatatcttagtcgga
gcgcctctatttatgaaccttggacaggatggcaaacagcgtgaggtcgggcgggtttac
gtttatctccaagaccagcttgaaaacttcaagcagccaacgcagaccatcacgggaact
gataagtttgggcgctttggcagtgccatcaccatccttggggaccttgactctgatgga
tacaaggatgtggcgatcggagcaccatatgctggtgaagatggcaatggaagagtgttc
atttacctgggccatgctaatggactgctctcaaaatcttaccaagagctgaagggaacc
tgggcccctggtttagtatcagcaggatttggcttctcgctgcaaggaggcgcagatata
gatgcaaataactacaccgatttgattgttggtgctcatgatgttgacaaagttctactg
tacagagcaaggcctgttataacagcaaacgcccatatcatacttgtgcctgacattcta
aatccagaagaaaaaaaatgcgtattgtcacagaaatctaccttagtgacatgtcttgag
gttcgggtttgtgtaatggtaaaaggacatgacattggccaatttgttttgaatggtcaa
atcgagttggacaaaaataagcagcgttcccagcgacgaatccttttcctgcaatcatac
caagcccagaaaaatttccagttttctctgatgagaaataaacaagcagcctgccaaaac
ttcactgcctacctcaggcaagaaacggagtttaaagacaagctgagtccaattgttgtg
actgtgaactgcagtctgtctgaggagcaacagctggattctggcaaactgaagccagtg
ctgagtccccgcagtcaaacctgggtaactaaaaagactcgcattcttctggactgtgga
gatgatggaatatgcatcccagatctcaaattaaatgcaacagtagataagacccacttg
attgctggagactcaaatccactcactgtgactatcactgcagtcaataatggagaagga
gcctatgaaacagaacttcacattcccatccttccacaagtagacttcaacaaagttgtg
caggacagtaagggcactacgaagctgagctgtaacgtgcaggcggagaatgccacaaaa
actttgatctgtgacctcggtaatcctatgaaaagtggtgcacagatatcggcaaggttc
catttcatggttcacaacttggaccaggtggagaacatcacgctcagcatgcagattaaa
agtaaaaacatacaaaattccagcagtgaggagatctatttgacgttccctgttcaagtt
gtgacccagatttatctaacaggggcttcactacctgagaacattgtcctcccctatgtt
gatctcgagtcacctgcagatctagaagtgaagaatgagtctctgccaatgatacaacac
acctatgagctacataacaatggtccatcagcaattagtgatgctgtacttgaaattgac
tggcctgcagctttccttggtaacagtttactgttcaaatcgaagatcattccatggggc
caaatcaaatgcacagtgaaagcttccaatgctgaaaattggatagaaacaatgagtaca
atgagtccattgtctgtaactactgagaactcccgacataacataaataaaagagatgtc
agcaaggtggaaaatacaacggaggagatcatctttaatttgacttgcaccacggtgatc
tgtgtgaaaattatgtgtcgcgtgggacttctggagaaagagaagcgagctgtggtaaac
ataaactctcagctcaggatggagttctttgtgcagaaccgtaataaacagtttacattc
cagtccaaagcatcatacattgtgcaagaagtgccatacaaagtacagcctgtagaattt
cccagtaacaatacgatggtagtaactcaaattggccgcagtggtcctgaggttgtttta
cccatacctgtctggtgcattattgttgctgttcttggtggtctgctccttgtgactctg
atggtattcatcctttggaagtgtggatttttcaaacggaaactgccaccaactgaaagg
gaagagttgctgtaa
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