Hemiscyllium ocellatum (epaulette shark): 132830746
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Entry
132830746 CDS
T09720
Name
(RefSeq) DNA mismatch repair protein Mlh1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03430
Mismatch repair
hoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132830746
03460 Fanconi anemia pathway
132830746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132830746
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
132830746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
132830746
NCBI-ProteinID:
XP_060704566
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Position
32:11807339..11809507
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AA seq
722 aa
AA seq
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MVTPGVIRRLEETVVNRIAAGEVIQRPANATKEMVENSLDAKSTSIQVTVKDGGLKLIQV
QDNGTGIRKEDLEILCERFTTSKLQKFEDLASIATYGFRGEALACISHVAHVTVTTKTAD
GKCAFRANYCDGRLKAPPKPCAGNQGTQITVEDLFYNIAIRRKALKNPSDEYSRIVEVMS
RYAIHNSGVNFAVKKQGETVADVRTLPNASTLDNIRTIFGNAVSRELIEVYFEDPKFAFT
MKGYISNANYSVKKCIFLLFINHRLVESTALRKAIETVYAAYLPKNTHPFLYLSLEILPQ
NVDVNVHPTKHEVHFLHEDSIIESVQQHIESKLLGSNSSRTYFTQTLLPGPTITSNDFIK
PSVASATLPSSSDKPYAHQMVRTDSKEQKIDAFLQPINKPQEALPTTVSVDGGTVCQDSE
MEDLSDIDLLAAEKAGSSSMSIQKPLHPCNDDPSSAPARKRSRVDSPGEIKEANSSHEMT
AAHLPKRRIINLTSVLTLQGEISSQNHAGLQDMLQNHSFVGCVNPQWALVQYQTKLYLIN
TTKLSQELFYQILIYDFGNFGVLKLSSPAPLYELAMLALDSPESGWTEEDGPKEGLAEYI
VDFLKTKSEMLQDYFSLSIDEEGNLTGLPLLLENYVPALEGLPMFILRLATEVNWDEEKE
CFEKLSKECGMFYSIRKEYTLDTESQVSPNPSQQEFGSDKPWKWTIEHVVSKAFRTLLEK
NK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggtgactcccggggtgatccgcaggctggaggagacggtggtgaataggatcgctgct
ggcgaggtgatccagagacctgcgaatgccactaaagagatggtggagaacagtttggat
gccaaatctacaagtattcaggttactgtaaaggatggtgggctgaagttgattcaggtc
caggataatgggaccggcatcaggaaggaagatttggaaatactttgtgaaagatttact
acaagcaagttacagaaatttgaagatctcgctagtattgctacttatggattcagagga
gaggctcttgcctgcataagccatgtggcacatgtcactgtaacaaccaaaactgctgat
ggaaaatgtgcattcagagctaactactgtgacgggaggttaaaggctcctccaaagcca
tgtgctggaaaccagggtacacagatcaccgtggaagatcttttttacaatattgccata
agaaggaaagctctgaaaaatcccagtgatgagtattctagaatcgtggaagttatgagc
aggtatgcaatccacaattcaggagtgaactttgctgtgaagaagcaaggtgaaactgtt
gctgatgtgagaacattgcctaatgcctcaactctggacaatattcgaacaatatttggg
aatgctgtaagcagggaattaattgaagtatattttgaagatccaaaatttgctttcaca
atgaaaggctatatatcaaatgcgaactattctgtgaaaaagtgtatctttttacttttc
atcaatcatcgcttggtggaatccactgctttacggaaggcaatcgaaactgtctatgca
gcctatcttcctaaaaatacacatcccttcctgtatctgagccttgaaatattgccacag
aatgttgatgtaaatgttcatcccacgaagcatgaagtacattttctccatgaggacagt
atcattgagagtgtgcaacaacatattgaaagtaagctacttggttccaactcctcaaga
acctacttcacacagactttactacctggcccaaccataacctccaatgactttatcaag
ccttcagtagcatcagctacacttccaagttcgagcgacaaaccatatgctcatcaaatg
gtgcgcacggactccaaggaacaaaaaattgatgcctttctacaaccaatcaacaaacca
caggaggcactacccactactgtttctgttgatggaggaactgtgtgtcaggactctgag
atggaggacctaagtgatattgacttacttgctgcggaaaaagctgggagctcaagtatg
agcattcagaaacccttgcatccatgcaatgatgacccatccagtgccccagccaggaaa
cgatcaagggtagattcaccaggtgagataaaagaagcgaactccagccatgagatgaca
gctgcccatcttccaaagaggagaattattaacttaaccagtgttctcaccctgcaaggg
gagatcagcagtcagaaccatgcaggcctacaagatatgttacagaatcattcatttgtt
ggttgtgtaaatcctcagtgggcactggtgcagtatcaaacaaaactttacctgatcaat
actactaaactcagtcaggaattattctaccagatcttaatctatgactttggtaatttt
ggagtgttgaagttgtcgagccctgcccctttgtatgaactggcaatgctagcattggat
agtccagaaagcggctggacagaagaagatggtcccaaagaaggactggcagagtatatt
gttgattttttgaaaacaaaatctgaaatgctacaagattacttttcccttagtattgat
gaggaaggaaacctgactggattacctctactcttggaaaactatgttccagctctggag
gggttgccaatgttcatcctgcgtctcgctacagaggtgaactgggatgaagaaaaggag
tgttttgaaaaattaagcaaggaatgtggtatgttttactccatcagaaaagaatataca
ctggatacagaatctcaggtgtcaccaaatccgagtcagcaggagtttggtagtgacaag
ccctggaagtggactatagaacatgttgtttccaaagctttcagaactctcctagagaaa
aacaaataa
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