Hemiscyllium ocellatum (epaulette shark): 132831045
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Entry
132831045 CDS
T09720
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132831045 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hoc03041
]
132831045 (dhx8)
Enzymes [BR:
hoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132831045 (dhx8)
Spliceosome [BR:
hoc03041
]
Complex C
Other components
Step II factors
132831045 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
GIPC1_GH2
AAA_22
AAA_19
PRP38_assoc
nSTAND3
Transformer
AAA_16
TsaE
ABC_tran
Sigma54_activ_2
PhoH
Presenilin
Motif
Other DBs
NCBI-GeneID:
132831045
NCBI-ProteinID:
XP_060705081
LinkDB
All DBs
Position
32:complement(34435855..34485517)
Genome browser
AA seq
1198 aa
AA seq
DB search
MADVALDELSKLEYLSLVSKVCTELDNHLGINDKDLAEFIINLAEKNITFETFKGALVKN
GAEFTDSLISNLLRLIQTMRPPAKPSTSGKVETVKPKSEKEKMKELFPALCLPDTLPTKS
LLDEDDMKVAADALKELEALMPSKADHKKSSKRSSNEKGKRKRRSRSRSRDRDRDRDRKR
HRRSRSRSHSRDRNKSKSSRRSRSRSLSPNRDHKDRVRANEKNCEKRKERHVDRPPPEEP
SVGEIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKIK
VLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNVGGETNEETTMRNPDRPSNLSLVNTPEIE
DDVLERKRLTKISDPEKWEIKQMIAANVISKEEYPDFDEETGILPKVDDEEDEDLEIELV
EEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERREMKQAQREAEMDSIP
MGLNKHWVDPLPDVDGRQIAANMRGIGMMPQDIPEWKKHAFGGNKASYGRKTQMSILEQR
ESLPIYRLKEQLVQAVHDNQVLIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVA
AMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLSPYAII
MLDEAHERTIHTDVLFGLLKKTVKKRPDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY
PVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSMGP
DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQ
KVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQR
TNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAE
FPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQAEGDH
LTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVR
VQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYM
REVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtggcgttagacgagctcagtaagctcgagtatctgtccctggtgtccaag
gtctgcactgaactagacaaccatctgggcatcaacgacaaggatctggctgaatttatc
atcaatctggctgaaaagaatattacttttgagactttcaaaggagcactggtgaaaaat
ggagctgagtttacggactcactcatcagcaatttgttacgtctaatacagaccatgcga
cctccagccaagccatcgacatctggcaaagttgaaacagtcaaaccaaaatcagaaaag
gagaaaatgaaggagctgttccctgctctctgcctgcctgataccctgcctacaaagagt
ctgctggatgaagatgatatgaaagtagcagcagatgcattgaaggagcttgaagccttg
atgccatcaaaggcggatcataaaaagagcagcaaacgcagctctaacgaaaaggggaaa
aggaagagaaggagtcgtagtcgcagcagagaccgagaccgagaccgagaccggaaacga
catcgcaggtcaaggtccagatcacactccagagatcgaaacaaaagtaaatccagcaga
cgatccagaagcaggagccttagccctaacagggaccacaaagatcgagtcagagcaaat
gagaagaactgtgagaagagaaaagaaagacacgtagacaggcctccaccagaggaacca
tctgtgggcgagatctacaatggcaaggtcaccagtattatgcagtttggatgctttgta
cagctggaaggtttaagaaaacgatgggagggtttggtacacatctctgagctcaggcga
gagggacgtgtagccaatgttgctgatgttgttagcaaaggtcaaagagttaagatcaag
gtgctatcgtttactggatccaaaacgagcttgagcatgaaggatgtagatcaagacact
ggagaggatctaaacccaaaccggcggcgcaatgttggtggggaaactaacgaggaaact
accatgaggaatcctgacagaccaagtaatctgtcactggtgaacacccctgagattgaa
gatgatgtgcttgaacgcaaacgtctcacaaaaatctctgatcctgagaagtgggagatc
aaacagatgattgcagcaaatgttatctcaaaagaggagtatcctgactttgatgaagaa
acaggcatccttccaaaagttgatgatgaagaagatgaggaccttgaaatcgagctagtg
gaagaagagcctccgttcctcaggggacatacaaaacagagcatggacatgagtcctgtt
aaaatagtaaagaatcctgatggctcactatctcaggctgccatgatgcaaagcgccttg
gctaaagaaaggcgggagatgaagcaagcacagcgggaggcagaaatggactcgatcccg
atgggactcaataaacactgggttgatccactacctgatgttgatggccgacagattgca
gcaaacatgaggggaataggaatgatgccccaagacatacccgagtggaagaagcatgcg
tttggtggaaacaaggcatcttatggtcgtaaaacccaaatgtctattcttgagcagaga
gagagcctgcccatctatagacttaaagagcagctggtacaggctgtccatgacaaccaa
gtcctgattgtcattggggaaactggttctggtaaaactacacaaatcacccaatacttg
gctgaagctgggtatacaacccggggaaaaattgggtgcacgcaaccaagacgtgtagct
gcaatgtcagttgctaagagagtgtcagaagagtatggatgctgtttaggtcaagaggtt
ggttacaccattcgatttgaggattgcaccagtccagagactgtgataaagtatatgact
gatggtatgttgctcagagagtgcctcatagatcctgacctgtctccgtatgcaatcatc
atgttggatgaggcccatgagaggactatccacactgatgttctgtttggacttctgaaa
aagactgttaaaaaacgtcctgatatgaaattgattgtaacatcagctactctggatgca
gttaaattctctcagtatttttatgaggcacctatcttcacgattcctggccgaacatac
ccagtggaagtgctttatacgaaagaacctgaaactgactatctggatgctagtttaatt
acagtgatgcagattcatttaacagaaccaccaggtgacattctggttttcctaactggt
caggaagaaatcgatactgcgtgtgagattctgtacgaacgaatgaaatccatgggccca
gatgtgccagaattgattattctgcctgtgtattctgctttgccaagtgagatgcaaacc
agaatttttgatccagcccctcctggtagcagaaaggttgtaattgctaccaacattgct
gaaacatcactgacaattgatggcatctactatgttgtggatcctgggtttgttaagcag
aaagtctataactcaaagacgggtattgaccagctcgtggtgactccaatttcacaggct
caagcaaagcagcgtgctggtcgtgcaggaaggacgggacctgggaaatgttatcgactc
tacactgaacgtgcctacagggacgaaatgttgaccacaaatgttcctgaaattcaaaga
actaatcttgctagtacagtactgtcactcaaggctatggggatcaatgacctgctttca
tttgattttatggatgcccctcctatggaaaccctaatcacagccatggaacagttgtac
acactgggagcactagatgatgaaggtttgctgacaagacttgggcgcaggatggcagag
tttcctctggaacccatgctttgtaaaatgctaatcatgtctgtacatcttggatgcagt
gaagagatgttaacaattgtgtccatgctatccgtacagaatgttttctaccgaccaaag
gataagcaagctcttgcagatcagaagaaagcaaagttccaccaagcagaaggggatcat
ctcaccttgcttgctgtctacaattcatggaaaaacaataaattttccaacccttggtgc
tatgaaaacttcatccaagcgcgttcccttcgcagagcacaggatatccgtaaacagatg
ctgggtattatggacagacataagctggatgttgtttcatgtggaaaagccacagtgcga
gttcagaaagcaatctgcagtggcttcttccgcaatgcagcgaagaaggacccacaagaa
ggataccgtacactgattgaccagcaggtggtatacattcacccctccagtgctctcttc
aacagacagcctgaatgggttgtatatcatgaacttgtcttgactactaaagaatacatg
cgagaagtgaccaccattgacccacgctggctagtagagtttgcacccgccttcttcaaa
gtgtccgacccaactaaactcagcaagcaaaagaaacagcagaggctggagcccctatac
aaccgctatgaagagccaaacgcctggagaatctcgcgcgcgttcagacgacgttaa
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integrated database retrieval system
