Hemiscyllium ocellatum (epaulette shark): 132831206
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Entry
132831206 CDS
T09720
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04514
Cell adhesion molecule (CAM) interaction
hoc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132831206 (lrrc4ba)
04517 IgSF CAM signaling
132831206 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hoc04515
]
132831206 (lrrc4ba)
Cell adhesion molecules [BR:
hoc04515
]
Immunoglobulin superfamily
NGL family
132831206 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
ig
V-set
LRR_9
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
LRR_RPS2
Ig_MYOM1
Calcyon
Sp38
LRR_6
DUF3139
Motif
Other DBs
NCBI-GeneID:
132831206
NCBI-ProteinID:
XP_060705202
LinkDB
All DBs
Position
33:10119984..10122015
Genome browser
AA seq
650 aa
AA seq
DB search
MMMMMMKAHHTQRMRFNLGRTVCHLAFLTFWTLSLLTGLVQSHICPKGCSCSNQFSKVIC
TRFELREVPDSISTNTRYLNLQENIIQVIKADTFKQLRHLEILQLSKNLIRQVEVGAFNG
LTNLNTLELFDNRLTTVPSAAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL
KKLEYISDAAFEGLINLRYLNLGMCNLAEIPNLTPLIKLEELELSGNRLEVIQPGSFQGL
TNLRKLWLMHAQIQLIERNAFDDLQSLEELNLSHNNLTSLPHDLFTPLHRLERVHLNHNP
WHCNCDVLWLSWWLKETVPSNTTCCARCHSPPNLKARYIGELDQSHFTCYAPVIVEPPTD
LNVTEGMAAELKCRAATSMTSVNWMTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTG
LYTCLVSNSAGNATASATLNVSAVDSSNSYSYFTTVTVETVEVVDEPRSTEREPGPTPSG
HWETPYSTTSLTPRSTKSTEKAFTVPITTEVTDNIMAGLDDVMKTTKIIIGCFVAITFMA
AVMLIIFYKLRKQHQLHKHHGQTRTIEIINVEDDMAEATPGDSCLTLPAVDHEHLNHYTA
YKAHYNNNTTTTGSGGGGALNCTKNPLHNSVHEPLLFKSSSKENVQETQI
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgatgaaggcacatcacacgcagaggatgagattcaacttgggcagg
actgtttgccatcttgcgtttttgaccttttggactttgtcactgctgactggactggtc
cagtctcacatctgccccaagggctgctcctgcagcaaccagttcagcaaggtgatctgc
acaaggtttgagctgcgagaagttcccgacagcatctccaccaacacccgctaccttaac
ctacaggagaacatcatccaggtcatcaaggcggataccttcaagcaactgcggcacctg
gagattctgcagctcagcaagaacctgatccgtcaggtggaagtcggagccttcaatggc
ctcaccaacctcaacacgctggagctcttcgacaaccggctcactacggtgcccagtgcg
gcttttgagtatctgtcaaaactccgggaactgtggctgaggaacaatcccatcgagagc
atcccttcctacgccttcaaccgtgtgccctcgctgcggcgcctggacctgggcgagctg
aagaagctggagtacatttcagacgcggcttttgagggcctgatcaacctgaggtacctc
aacctgggcatgtgcaacctggcggagatcccgaacctcacgcccctcatcaagttggag
gagctggaattgtctggcaaccggctggaggtcatccagcccggctccttccagggcctc
accaacctgcgcaaattgtggctgatgcacgcccagatccaactgatcgagcgcaatgcc
tttgatgacctgcagtcactggaggagctcaatctgtctcataacaacctgacatcactg
ccgcatgacctcttcacacctttgcaccggctggagagggtgcacctcaaccacaaccct
tggcactgcaactgtgatgtcttgtggctcagctggtggctgaaggaaacggtgcccagc
aacacaacctgctgtgcacgctgccactcaccgcccaacctgaaggctcgctacatcggt
gagctggatcagagtcattttacgtgctacgcaccagtcattgtggaaccaccaaccgat
ctcaacgtgactgagggaatggctgctgagctcaagtgccgtgcggctacttccatgacg
tccgtcaactggatgacccccaacggcactctgatgacccatggctcataccgggtacgc
atctcagtgctgcatgacggcacgctcaatttcaccaatgtgacagtgcaggacacaggc
ctgtacacctgcttggtcagcaattcagctggcaatgccacagcctcagccacactcaat
gtctcggctgttgacagcagcaacagttacagctatttcactaccgtgacggtggagaca
gtggaggtggtggatgagccccggtcgactgaacgtgagcctgggcccaccccctcaggc
cactgggagacaccctactccaccacctccctcaccccccgtagcaccaagtccaccgag
aaggcctttactgtgcccatcaccactgaggtgacagacaacatcatggcgggtctggac
gacgtgatgaagacaaccaaaatcattattggctgttttgttgccatcaccttcatggct
gctgtcatgctcatcatcttctataagctgcgcaaacagcaccagctccacaaacaccac
gggcagacccgcaccattgagatcatcaacgtggaggatgacatggcagaggccacacct
ggtgacagctgcctgactctcccagctgttgaccatgagcacctcaaccattacacggct
tacaaggcccactacaacaacaacaccacaaccactggcagtggaggcggcggcgccctg
aactgcaccaaaaacccgcttcacaactctgtgcacgaaccgctactctttaaatccagc
tccaaagagaacgtgcaagagacgcagatttaa
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