Hemiscyllium ocellatum (epaulette shark): 132831340
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Entry
132831340 CDS
T09720
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hoc03041
]
132831340
Enzymes [BR:
hoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132831340
Spliceosome [BR:
hoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
132831340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
132831340
NCBI-ProteinID:
XP_060705412
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All DBs
Position
33:28837838..28881557
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AA seq
695 aa
AA seq
DB search
MRGFGGDRDRGRDRGSNGPRFGGGPSRGGPSLGKKFGQPGERLRKKKWDLDELPKFEKNF
YVEHPEVVRLSPYDVEDFRRKKEITTKGTDCPKPVFQFHQANFPSYVMDVLCSLNFVEPT
PIQCQGFPVALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPFLERGDGPICLVLAPTRE
LAQQVQLVAEDYGKSSRIKSTCIYGGAPKGPQIRDLERGVEVCIATPGRLIDFLEAGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRDYI
QINVGALELSANHNILQIVDVCQETEKDLKLLHLMEEIMAEKENKTIIFVETKRRCDDLT
RRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDIKFVINYDY
PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNVKQARELIKVLEEANQAINPKLLQLVDHG
RGSGRGGRSRYRPTGSNPNTMYRDDRDRGRSRAFRDLDGDRRDRGDGGRFGSQRDTRDSG
GPLSKQSFRSAQTNSFGTPVYGQQSVQYPNFTQSGLYGGTNQSTYGAVTQAGFGKTGTFQ
SSSAGSSYSTSGYGTAAQSTAYGSSNYSASSTATAGRTPQSSAQFRQNGMGQQPQPLMSQ
TYQQSNSLLSYMSQGTYQYAPPPPPPPTSQGSSRK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagaggattcggtggagaccgtgaccgcggtagagaccgagggagcaatggcccacgg
tttggtggagggccgagccgtgggggtccttcccttgggaaaaaatttggacagcccgga
gaacgcctgaggaagaagaagtgggacctggacgagttgcctaaatttgagaaaaacttc
tacgtggagcaccccgaagtggttcgattaagcccgtatgatgtcgaggacttccgcaga
aagaaagaaattacaacaaaaggaacagactgcccaaaaccagtgttccagtttcaccaa
gcaaacttcccttcctatgtgatggatgttctgtgttcactgaattttgtggagccgaca
ccaatccagtgccagggctttccagtggcacttagtgggcgtgacatggtcggaattgca
cagactggatctggcaaaacgctggcttacttactgccagccattgtgcacatcaaccac
cagccattcctggagcgcggcgatggtcccatttgcttggtattggcaccaactcgagaa
ctagcacagcaggttcagctggttgcagaagactatggaaaatcttcacgtataaagagc
acttgtatttatggaggggcacctaaaggccctcagattagggacctagagagaggagta
gaagtctgtattgcaaccccaggccgtctaattgactttctagaagctgggaaaacaaat
ctgcgtcgatgtacttacctggtcctggacgaagctgaccgcatgttagatatggggttt
gaacctcagatccggaagattgtggagcagatccggccggaccgacaaaccctgatgtgg
agtgctacttggcctaaagaggtgcggcagctagcagaggatttcctgcgtgattatata
cagatcaatgttggagccctggagctgagtgcgaaccacaatattctccaaattgttgat
gtgtgtcaggagactgagaaggacctgaaattgctacatctgatggaggaaatcatggca
gagaaagaaaataagaccatcatctttgtagagaccaaacgtcgctgtgacgatctgact
cggagaatgcggagagacgggtggccagcaatgtgcattcatggagataaaagtcagcct
gagagagactgggtcctaaatgaattccgatccggaaaggcaccaatccttattgcaact
gatgttgcatctcgaggtctagatgtggaagacatcaaatttgtcatcaattacgactat
cccaattcttctgaggactatgtacatcgcattggccgtacagcacgcagtactaataaa
ggcacagcctacaccttcttcacaccaggcaacgtgaaacaagctagggagctgatcaaa
gtgctggaagaggccaatcaagccattaacccaaaactcttacaacttgttgatcatggg
agaggaagcggaagaggaggccgttctcgttaccggcccactggctccaaccctaacacc
atgtacagagacgatcgtgacagaggccgcagccgggcttttagagacctcgatggggat
cgcagagacaggggagatgggggcaggttcgggagccagagagatacccgagacagtggc
ggtccattgagtaagcagagtttccgatctgcgcagaccaacagttttgggacccctgtg
tatggccaacagtcagttcagtatccaaattttacccaaagtgggctgtatggggggact
aatcaaagcacatatggggctgtaactcaagcaggatttgggaaaacgggtacctttcaa
agttcaagtgcagggagcagttacagtacctccggttatggtactgctgcccaaagcacg
gcttatggttcaagtaattatagtgcttcatccactgccaccgcagggcgaaccccacag
tcctctgcgcaattcaggcagaatgggatggggcagcagccacagccactgatgtctcaa
acatatcaacagagcaactcactgttgagttacatgtcccaggggacctatcagtatgca
ccgcctcccccaccaccacctacatcacagggatcaagccgaaaataa
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