Hemiscyllium ocellatum (epaulette shark): 132831369
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Entry
132831369 CDS
T09720
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoc03000
]
132831369 (prdm1a)
Transcription factors [BR:
hoc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
132831369 (prdm1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
zf-C2H2_FBX41
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
132831369
NCBI-ProteinID:
XP_060705458
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Position
3:complement(33499201..33592388)
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AA seq
822 aa
AA seq
DB search
MKMDVEDVDMTQWTEAEFEENCTYIVNDQSWEPMANSDLTHAQASLPRNLKFKYASHSNE
VLGVMSAEYIPKGTRFGPLVGEIYTNETVPKNANRKYFWRVYSKGDLHHFVDGFDESKSN
WMRYVNPAHSKQEQCLAACQNGMDIYFYTVKPIPANEELLVWYSSEFAERLHYPASADLQ
MSKLKCIDLPRREELQGKWQHRSGDQPDASATEQRPKEKRYASDLADRVKSDNVMHKSQS
DEGNTMKEKNQVQAIQPLAAPGKEMQDINKKHSPERTFFPRVVYPVRPHIADDYLKPSPV
FGIERHGYVKHSPIQPSLTSSPSSRSSPDQSLKSSTPHSSPDSHISSLTPSTQEHKQAFP
YLSGPYNREGLSSFTAYPPPGHLPPAFLHSYNPVNTQYSRFLLPHYPVGCNGLNSFPGLS
GINGVNSFSLLPKMYPLYSSLLGNGGLPQHLFNQTVLPSALHPEGARRLLLPEQQKDFLI
PARNSAFSIAGSAASLKDRPTSPCNGSPTAGTAASYSEHLMQPKPTSAGLVSSTSSSSEE
AMNLIKPKRSLTGYKTLPYPLKKQNGKIKYECNVCYKTFGQLSNLKVHLRVHSGERPFKC
QTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCP
AKFTQFVHLKLHKRLHTRERPHKCLQCHKTYIHHCSLKAHLKGNCPIAPGAGRSLEDLNR
LNEEINKFDISDNADKLDDLGHSDDVESAIEKQIFSMLRREMEEASLKNPFQRNLGNNLL
SSGCNLYENLETPVLKISRGSPLPLVPVKVKQETVEHIDPCN
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggatgtggaagatgtggacatgacccagtggacagaggctgaatttgaagag
aactgtacctacattgtaaacgaccagtcctgggagcccatggcaaacagtgatctaaca
catgctcaagcatccctgccccgaaacctaaagttcaagtatgcatctcactcaaatgag
gtgctgggagtaatgagcgcagagtacattcccaaagggacacgctttggaccactggtg
ggtgagatctacaccaatgagaccgtccccaaaaatgcaaaccgaaaatacttttggagg
gtgtactccaaaggtgatttacatcactttgtcgatgggtttgatgagagcaaaagtaac
tggatgcgatacgtgaatccagcccattcaaagcaggagcagtgcctggcagcttgtcaa
aatgggatggacatctacttttacacagtgaagcccatcccagccaatgaagagttactg
gtctggtacagcagtgagtttgcagaacgcctccactacccagcctctgcggatcttcag
atgtctaagctaaagtgcattgacctgcctcgaagggaggaacttcagggaaaatggcag
cacagatcaggagaccagcctgatgcttctgctacagaacaaagaccaaaggaaaaaagg
tatgcaagcgacctggccgacagagtgaagagtgacaatgtgatgcacaaaagtcaaagt
gatgagggaaacacgatgaaggaaaagaaccaagtacaagcaatccaaccactggcggct
ccgggaaaagaaatgcaggacatcaacaaaaagcacagcccagaacgtaccttcttccct
cgtgttgtgtacccagtcagacctcacattgcagatgactacttgaaacctagtcctgtt
tttgggatcgagaggcatggttatgtcaaacactctccgatccagccttcgcttacctcc
agtccgtcgtctagaagcagcccagaccaaagtttgaaaagctcaacgccccacagcagt
ccagactcccatatttcctctctgacaccttcgactcaggaacacaaacaggcctttcct
tacttgagtggaccttacaaccgagaaggattgagctccttcacagcctaccctcctcct
ggtcatctgcctccagccttcttgcattcctataatccagtaaacactcagtattccagg
ttcttgttacctcattacccagttggttgcaatggtttgaacagcttcccgggcctcagt
ggcatcaatggtgtgaacagcttcagccttcttcccaaaatgtaccccttgtacagcagc
cttttaggaaatgggggcctgccccagcacctattcaaccagacggtccttcccagtgcg
ttacatcctgaaggagcccgaagacttctgcttcctgagcagcagaaagactttctcata
ccagcgaggaatagtgccttttcaatcgctggctctgctgccagtttgaaagacaggcct
acaagcccctgcaacggttccccgacagctggcacggctgcctcctattctgaacattta
atgcaacccaaacctacctcagctggcctggtcagcagcaccagcagcagcagtgaagaa
gccatgaatctcatcaaaccaaagcgaagtcttactggttacaaaacactcccatatcct
ctaaagaagcaaaatgggaagatcaagtatgagtgcaatgtctgctataagacctttgga
cagctatcaaatctcaaggtccacttgagagtacatagtggggagagaccatttaagtgt
cagacctgcaataaaggcttcacacagctcgcacacctacagaagcactatttagttcat
actggagaaaagccacatgaatgtcaggtttgccataaacgtttcagtagcaccagcaac
ctgaagacccacctacggttacactcgggtgagaaaccttaccagtgcaagctgtgcccg
gcaaaattcacacagtttgttcatctcaagctgcacaaacgcctgcacacaagggagcgt
ccccacaaatgcctgcagtgccacaagacctatattcaccactgcagtctgaaggcgcac
ctcaaaggaaactgccctattgccccgggtgctgggcgatccctggaggacctgaaccgc
ctaaacgaggagatcaacaagtttgacatcagtgacaatgcggacaagcttgatgacttg
gggcacagcgatgacgtggaatcagcgatcgagaagcagatcttcagcatgctcaggaga
gagatggaagaagccagtctaaagaacccttttcagaggaacctgggcaacaacctcctc
tcctctggctgcaacctgtacgagaacttggagacgccagtcctgaaaatatctcgtggt
agccctctacctctcgtgcccgtaaaagtcaagcaagaaacagttgaacacatcgatcca
tgtaattag
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