Hemiscyllium ocellatum (epaulette shark): 132831376
Help
Entry
132831376 CDS
T09720
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03030
DNA replication
hoc03410
Base excision repair
hoc03420
Nucleotide excision repair
hoc03430
Mismatch repair
hoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132831376 (pold1)
03410 Base excision repair
132831376 (pold1)
03420 Nucleotide excision repair
132831376 (pold1)
03430 Mismatch repair
132831376 (pold1)
03440 Homologous recombination
132831376 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoc03032
]
132831376 (pold1)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132831376 (pold1)
Enzymes [BR:
hoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
132831376 (pold1)
DNA replication proteins [BR:
hoc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
132831376 (pold1)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
132831376 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
132831376 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DUF6356
Motif
Other DBs
NCBI-GeneID:
132831376
NCBI-ProteinID:
XP_060705471
LinkDB
All DBs
Position
33:complement(10662804..10776954)
Genome browser
AA seq
1114 aa
AA seq
DB search
MQSARNKASGGTVDGNRTQAKRLRGDWDDDGPSQFEEELAYLDEVEAEMAMDAKEMQTSH
DMVPIGNLFSSKVTNNKWQRPPVPKINPQVDNIAFQQVELEYYVGSHVAGMPGSKQGPVP
VTRMFGITMEGNSVCCHVHGFMPYFYVKAPPGFGSEHLHDFQRELNTIVIKDMRSNKDNI
SQAVLAVDICMKENMYGYGGNTKTPFLKITMALPRLIAPAKRLLEQGFRFGSTPMCNYQS
YEANIDFEIRFMVDSDVVGCNWIELLAGKYLLREEQITGNSTTARDKPRKVTLAQIEVDV
AWTDFISHPAEGEWQKIPPLRVLSFDIECAGRKGVFPEADKDPVIQIANMMLRQGEKDPF
IRNVFTLRSCASIVGSQVLCFEKENELLKAWSEFIRVADPDIITGYNIQNFDLPYLINRA
QALKVTTFPFLGRIPSIKSVIRDSSFQSRQMGRRENKVINIEGRVQFDLLQVLLRDYKLR
SYTLNAVSFHFLQEQKEDVQHSIISDLQNGNEQTRRRLAVYCLKDAYLPLRLLEKLMCVI
NYMEMARVTGVPLPYLLSRGQQIKVVSQLLRQAMKHDLVMPVVKTEGGEDYTGATVIEPV
KGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLKPGAVEKYNISSDQFIKTPTGDQFVKAS
VRKGLLPEILENLLSARKRAKAELKKETDPFKQKVLDGRQLALKVSANSVYGFTGAQVGK
LPCLEISQSVTGFGRQMIEKTKQLVESKYTIADGYKADAKVIYGDTDSVMCKLGAETVEE
SMALGREAAEWVSSHFTPPIKLEFEKVYFPYLLINKKRYAGLYFSSNPNTHDKMDCKGIE
TVRRDNCPLVANLINTCLQKILIDRDPSGAVEHAKEVISDLLCNRIDTSQLVITKELTRT
ADEYAGKQAHVELAERMRKRDAGSAPNLGDRVPYVIICAAKGVAAYMKSEDPIYVLENNI
PIDTQYYLEQQLAKPLLRIFEPILGETKAEAVLLKGEHTRCKTVLTSKVGGLMAFAKKRS
TCIGCKAVLNDNGAVCSYCKCRQSELYQKEVSQLKLLEEKFSRLWTQCQRCQGSLHEDVL
CTSRDCPIFYMRKKVQKDLGDQEKVMMRFGPATW
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctgcaagaaataaggcatctggtggcactgttgatggaaatcgaacacaggcg
aagaggctccgtggagattgggatgatgatggcccatcgcagtttgaagaggagctggca
tatcttgatgaagtggaggcagaaatggcaatggatgccaaggaaatgcaaacatcacat
gatatggttccaattggaaatttgttttcttccaaggttacgaacaacaagtggcagcgc
ccccctgtacccaaaattaacccgcaggtagataatatcgccttccagcaggtggagctg
gagtactatgtaggttctcatgttgctggaatgcctgggagtaaacagggaccagttcct
gttactcgcatgtttggaattacgatggaagggaatagtgtctgctgccacgtgcatggg
ttcatgccctacttctatgttaaggcaccacctggattcggttcagaacacctccatgat
tttcaacgggaattgaacacaattgtgattaaggacatgagatcaaataaggacaacatt
tctcaagcagttttggcagttgatatctgtatgaaggagaatatgtatggttatggagga
aatactaagacaccgtttctgaagattacgatggcgctacctcgcttaatcgctcctgct
aagcgcctgctggagcaaggattccgctttggttcaactccgatgtgtaattatcagtca
tatgaggccaacatagactttgaaatcagattcatggtggacagtgatgtggttggctgc
aattggatagaactactggctggaaagtacttgttaagagaagaacaaataacaggaaac
tccactactgcaagggacaaacccagaaaggtaacactggcacagattgaggtggatgtt
gcctggacggatttcatcagtcaccctgctgaaggagagtggcagaaaatccctccactt
cgagtgctgagctttgacatagagtgtgctggcagaaagggtgtttttccagaggctgac
aaagaccctgtaatacagattgctaacatgatgctgcgacagggtgaaaaggaccccttc
atccgtaatgtcttcactcttcgatcttgtgctagcattgtggggtcacaggttctgtgc
tttgagaaggaaaatgagctgctaaaggcttggtcagagtttatcagagtggctgatcct
gacataattactggatacaacattcagaactttgacttaccatatctgattaaccgggca
caagcactcaaggtgacgacttttccattcctgggtcgtatccccagcattaagtctgta
atccgagattcctcgtttcagtcccggcagatgggccgcagagagaataaagtgatcaac
attgagggaagagtgcagtttgatctcctacaggtgttgctaagagactacaaactgcga
tcatacactttgaatgcagtgagtttccatttcctgcaggagcagaaggaagacgttcag
cactcgatcatctcagacctacagaatggtaatgagcaaacacgaaggcgattagctgtc
tactgcctgaaggatgcctacctgcccctgcggcttttggagaaattgatgtgtgtaatt
aactatatggaaatggccagagtgacaggagtacccctaccctacctcctttcacgagga
cagcaaatcaaagtggtctctcagttgctccgacaggcaatgaagcatgacttggtgatg
cctgtggtcaaaacagagggtggagaggactacactggcgctactgtcattgagccagtt
aaagggtattatgatgtccccattgcaactctggatttttcctcactgtatccatctata
atgatggcacataacctctgttacacaacactgctgaagccaggtgctgtggaaaagtac
aatatttcttcagaccaattcattaagaccccaacaggtgaccaatttgtcaaagcttca
gtacgaaagggtcttcttccagaaatcttggaaaatcttctgtctgcaaggaaaagggca
aaggcagaactaaagaaagagacggatccattcaaacaaaaggttcttgatggtcgtcaa
cttgccctgaaagtgagtgcaaattcagtgtatggtttcaccggagcacaggttggcaag
ctaccttgcctggaaatatcacagagcgttactggatttggtcgacaaatgattgagaaa
actaagcagctcgttgaatcaaaatacaccattgcagatggctacaaagcagatgctaag
gtaatttacggtgatacggattctgtcatgtgtaaactgggagccgagactgtggaagaa
agcatggctttgggtcgggaggcagccgagtgggtttcaagtcacttcactcctcccatt
aaactggagtttgaaaaggtgtatttcccatatctgctgatcaacaaaaagcgctacgct
ggattgtatttttcctccaacccaaatacccatgataagatggattgcaagggtatagag
actgtgagaagggataattgcccactggtagccaacctgatcaatacttgtcttcagaag
attttaattgacagggatccatcaggagcagttgagcatgcaaaagaggttatctccgat
ttgctgtgtaataggatcgacacctcacaacttgtgattacaaaggagctcacaaggacg
gctgatgagtatgcagggaaacaggcccatgtagagctagcagaaaggatgcgaaagcga
gatgcaggcagtgcaccgaatcttggagaccgggtaccctatgtcatcatctgtgctgca
aaaggtgtagcagcctacatgaagtctgaggatccgatctatgttttggagaacaacatt
ccaattgatacgcagtattatctggagcagcaacttgcaaaaccattactgcgaattttc
gagcccatcttaggcgagacaaaggctgaagctgtgctcctgaagggagaacacacaaga
tgcaagactgtactgacatcaaaggtgggcgggctcatggcctttgcaaagaaaagaagc
acatgcataggatgcaaagctgtgcttaatgataatggtgctgtgtgcagttactgcaaa
tgtcgtcagtcagagttgtaccagaaagaggtatctcaactgaaactattggaggagaag
ttctcacggttgtggactcagtgccagcgctgtcagggtagtttgcatgaggatgtgctt
tgtaccagtcgggattgccccatattctacatgcgaaagaaggtgcagaaggaccttggt
gaccaggagaaagtaatgatgcgatttggaccagccacttggtga
DBGET
integrated database retrieval system
