| Entry |
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| Symbol |
tnrc6ba
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| Name |
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
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| KO |
| K18412 | trinucleotide repeat-containing gene 6 protein |
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| Organism |
hoc Hemiscyllium ocellatum (epaulette shark)
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| Brite |
KEGG Orthology (KO) [BR:hoc00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:hoc03019]
132831419 (tnrc6ba)
03036 Chromosome and associated proteins [BR:hoc03036]
132831419 (tnrc6ba)
Messenger RNA biogenesis [BR:hoc03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132831419 (tnrc6ba)
Chromosome and associated proteins [BR:hoc03036]
Eukaryotic type
Gene silencing
piRNA pathway
132831419 (tnrc6ba)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
33:3733755..3944566
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| AA seq |
1801 aa
MQVNDGSRRQQACLKTFMEMEKMTEELHILTKEQDVKAEIQAECEDFTRDEHDDTSESPV
EESKQEKEEEKEEQLMEEKKRKKEDKKKKDATQKVTEQKTKVPEATKPSLSQPPTATPVG
SVPTPAANGGNNAKRAVATNGQPQNAARYLPREVPPRFRQHEHKVLLKRGQPPPPSCGLL
GGGAGPPGLPGSNPGAAQPLTQPNCPLQHGSTPVDTNPGGAGSNYANSAWGSGSSSTDLN
HGWDKLIVDGSDMEAWPCITGRDSESASEHVDNEGASNFGSEKSLPPGSGAARSCKGAAN
QFAAGSGKNECKLGAWNMGLVPKPSHASSISSESKDGLNNWKNLSNPDGAGLGLTLNPNI
NPSAWPVLGQEGNSGKGTLETDVSSSSAQLSAVGQSPRDQDGTSASAWANKSKTENAGVT
WNASVGEQPQALNTDGPNNGDTNSLNANSQSTGNPLQNKGVSDTTGNGTWNMPMGMGLGN
PLVLNQSVSTEASSEGSIRGTMEGRGTGGSWNTVWGSSGTDSISGQNGTGADGNSGRNSD
DTAKAGSGLKQLLVNRSRTESWDSNSGSWDSEAQDPNKAKNWGKGNRTASSGAQGLWGQQ
PGTDNRSEGEWSGTPNEQNCGTGGWDNHRVNPLPENQGENSQNSNWVKASSSTGSDSGSR
SNNKRGGSENHPGGRRLNKTDPLDQEEVIQSVISRSDLDPRVLSNTGWGQTQIKQNTVWD
VQESPRNERRTDRGTEGWESTTTQSTNSGGWGEASSQSSHCNSGWGDAPQSSNMESDSPS
GWVDPKNSQGWGGGTPEEKAPSWNDAPRIKEPGWGARQQPTQGWSPNNGWGDGSGQPAEQ
PKAGGWDSSNSRWGDSGRGEVGSWGGGNSNSNQRSGWEDPTRHQGWGEPSKTAANNWNKQ
QDVSGSWGTNSAGSRQSGPGWGSASVPPAPIPVVPKEEEPTGWEEPSPQSISRKMEIDDG
TSAWGDPNSYNYKNVNLWDKNSQSESSGSGPAPREQNAANVVTGRGSTSSSGSKAMQDGW
GGGDRPTVASTRPPSWEEEEDGSIGLWNSAGTQESSSPYNSTNWTSSGKKIHKGSMKGGN
NDTWINPLSTQFSKMGLLREPSEDGVGNKMDLAVVGLSDKKLESDKRGMNMDYNGMMRKD
RSGFRPPNSKDSPTADSGPYFEKNGNHGLFGGSTAQSRGVHTPQVQPMNSSQPNLRAQVP
PQFLPPPQVPASMLKHTAPNGALNPALFSLGPQLSPQQIAMLSQLPQLPQLQLAYQLLIQ
QQQQQVLQNQRKLSAAVRQQQEQQLARIVSALQQQQQQQHRHNTPGMKHSPSHPGIPKQH
LDNVVPNSLPSGLPDFQTKGQLQPGYPMGLGSNMNVNQLDVNSIVGMKEPQSQQSRLKQW
TTMEGLSPATPPPDHNPLKNGAISSSMAPPKSRDSLPYYEMIAGDSLASHSGPASDNWST
PKLSNGSSSSSWPPEFRPGEPWKGFQNIDPESDPYATPASMINSSAAPPSPDSEHQLLRD
RSTGSSSSLNTSLPSPGAWSYSASNSSYSTVQSTSAKFNDFKSTWSPDPIGHPRMWKNQM
SSKNTNPPTRPPPGLTNQKPPSSLWGSGAPRFSRGWGVQDSRYALSSNWGDGSSGGSVRV
SSWLLLHNLTPQIDGSTLRTICMQHGPLITFHLNLTHGTALVRYSTKQEAIKAQTALHMC
VLGNTTILAEFVSEEEVNRYFAQGQLSTPSPGWQTLETGQSQMDPVGSSLHSFGGRSGLG
QWNSAGGVGRGSGNLAGASLWATPSYTASLWGAPNSDDSHRMGSPAPLLPGDLLGGGADS
I |
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| NT seq |
5406 nt +upstreamnt +downstreamnt
atgcaggttaatgacgggtcaaggcgccaacaagcgtgtctcaagaccttcatggagatg
gagaagatgacagaggagctgcacatattgaccaaggaacaggatgtcaaggcggagatt
caggcagaatgtgaggattttacccgagatgaacacgacgacacatctgaatcccccgtc
gaagagagcaagcaagagaaggaagaagaaaaggaagaacagttaatggaagaaaagaaa
aggaaaaaagaggacaagaaaaagaaagacgccactcagaaggttacagaacaaaaaacc
aaagtgcccgaagcgacgaagccaagcctaagccagcctccaactgccaccccagttggc
agcgttccaacaccagccgccaacggtggtaacaatgccaaaagggcggtggccaccaac
ggccagccacagaacgccgcccgctatctgccccgtgaggtgcctcctcgatttcgccag
cacgagcacaaagtgttactaaaacgtggtcagccccctccaccttcctgtgggcttctt
ggaggtggggcggggcctcctgggttgccaggatcaaaccctggcgctgcacaaccattg
acgcaacccaactgtccactgcagcacggcagtacaccagtggacactaaccctgggggt
gctggttcaaattatgcaaattctgcttggggttctggatcgtccagcactgacctcaac
cacggctgggataagttaatcgtagacgggtctgatatggaggcttggccttgcatcaca
ggcagggactctgagtcggcttcggaacacgtagacaacgaaggtgcctcaaactttggc
tccgagaagagcctgccaccaggaagtggcgctgccaggagctgcaaaggagctgcaaac
cagtttgctgctgggagcggaaagaatgaatgtaaattgggggcctggaacatgggcctc
gtgcctaaacccagtcacgcatcttccatctcttcggagagcaaagacggacttaacaat
tggaaaaacttgagcaaccctgatggagctggccttgggttgactttgaacccaaatatc
aacccatcagcctggccagtgttgggtcaggagggcaattctggaaaagggactttggag
actgatgtttcaagctccagtgcacaactcagtgcagtaggtcaaagccctagggatcag
gatggtacttctgcaagcgcctgggcaaataagtcaaaaacggaaaatgcgggtgttaca
tggaatgcttctgttggagaacagcctcaagctcttaacactgatggaccaaataatggc
gacactaactctttgaatgcaaactcacagagcaccgggaaccctttgcaaaataaggga
gtgtctgatacaacaggaaatgggacctggaacatgcccatgggaatgggtttgggaaac
cccttggtattgaatcaatctgtgagcactgaagcctcatccgaaggcagtattagagga
actatggagggacggggaacaggggggtcttggaatacagtttggggatcttctggaact
gattcaatttctggacaaaatggtacaggagctgatggcaatagtggacgcaacagtgat
gatacagcaaaggctggctctggtttgaaacagttactggtgaatagatcaagaactgaa
tcatgggatagtaatagtggatcttgggactctgaggcgcaagaccccaacaaagcaaaa
aattggggcaaagggaacagaacagcatcaagtggtgctcagggtttgtgggggcaacag
ccagggactgataatcgctcagaaggggagtggagtggcactcctaatgaacagaattgt
ggcacaggcggttgggacaatcatagggtaaatcccctcccagaaaaccaaggagagaac
tcccaaaattccaactgggtgaaggcctctagttccactgggagtgattctggtagtcga
agcaacaacaaaagggggggctcagaaaaccacccaggaggtcggcgcttaaacaagact
gatccccttgaccaggaggaggtaatacagtctgtgataagtaggtctgatctggatcct
agagtgttgtcaaatactgggtggggccaaactcagattaaacagaacacagtctgggat
gtgcaggagtcaccaaggaatgagaggcgcactgacagaggaacagaagggtgggagagc
accaccactcagagcactaactcagggggctggggtgaagcatccagtcaaagcagtcac
tgcaactctgggtggggagatgctccacagtcttcaaacatggagtctgatagtccaagt
ggatgggtggacccaaaaaatagtcaaggttggggaggtggaacaccagaagagaaggca
ccgtcatggaatgatgcgcctaggatcaaggaacctggttggggtgcaagacagcaacca
actcaaggttggtcccccaacaatggttggggtgacggaagtggacaaccagctgaacaa
ccaaaagcaggtggatgggatagttcaaactccaggtggggcgatagtggacgtggtgaa
gtaggatcttggggtggtggtaactctaattcaaaccagagaagtgggtgggaggatcca
acacgacaccagggatggggtgagccatcaaaaacagctgccaataattggaataaacaa
caagatgtctctggctcttggggcacaaactctgcagggagtcggcaatcaggacctggc
tggggctcagcctctgtgccacctgcacccatcccagttgtgccaaaggaagaagaacct
actggatgggaagaaccttcaccacagtccatctcccgaaaaatggagatcgatgatggc
acctcagcctggggtgatcccaacagctacaactataagaatgtgaatctgtgggacaag
aactcccaaagtgagagctctggaagtggaccggcgccacgggagcagaatgcagccaat
gtggttacagggcgaggttccacatcaagttctggttcaaaagctatgcaagatggatgg
ggtggtggtgatcgacctactgtagcaagtacccgccccccaagctgggaagaagaagaa
gatggttcaattggcctgtggaatagtgctggaactcaggagagtagttcaccctacaac
tcaactaactggacctctagtggaaagaaaattcataagggctccatgaaaggtggaaac
aatgacacatggataaatcctctctctacgcaattttccaaaatgggattactgagggag
ccttcagaagatggtgttggtaacaaaatggacttagctgttgttggtctatctgacaaa
aagctggaatctgacaaacggggaatgaacatggattacaatggaatgatgaggaaggat
cgatcaggattccggccaccaaattccaaagactcgcccactgcagacagtggaccctat
tttgagaagaatggcaatcatggtttatttggcggtagcacagcacaatccaggggtgtg
catacacctcaagtgcaacccatgaattcatcccagcctaaccttcgggctcaagtgcct
ccacagttcctaccccctcctcaggttcctgcctccatgttgaagcatactgctccgaat
ggtgccctgaacccagccctatttagccttggtcctcagttatcccctcaacaaatagct
atgcttagtcaactccctcaactcccacagctccaattggcttatcagctcttgattcag
caacaacagcagcaagtgctgcagaaccaacgaaagctctccgctgctgtccgacaacag
caagagcagcagcttgcccgtattgtaagtgctctgcagcagcagcaacagcaacaacac
cgacataacacccctgggatgaaacactcaccgtcacaccctggcatacccaagcagcac
ctggataacgttgtgcctaattctcttccctctggccttccagacttccagaccaaagga
cagcttcagccgggttacccaatgggtctgggttcaaatatgaacgtaaaccaattagac
gtcaacagtattgtaggaatgaaggaacctcagtctcagcaatctcggcttaagcaatgg
acaactatggagggtctttcacctgccactccgccacccgatcacaaccccctcaaaaac
ggtgctatttcgagcagcatggcaccaccaaagtctcgagatagtttgccctattatgaa
atgatagccggtgactctttggccagtcattcgggtcctgcaagtgataactggtccacc
ccgaagctctcaaatggttccagcagctccagttggcctccagaattccgccctggggag
ccatggaagggttttcaaaacattgaccctgaatctgacccgtatgcgacgccagcgagc
atgataaacagctctgcagcacccccatccccggactcagaacaccaacttctcagggac
aggagcacagggtccagttcctccctgaacacctcgctgccttcacccggtgcctggtcc
tatagtgcctcaaacagctcctacagcaccgtacagagcacttcagccaagttcaacgac
ttcaagtcaacgtggtctccagatccaatcggacatcccaggatgtggaagaatcagatg
tcatctaaaaacactaacccgccaactcgaccaccacctggactgaccaatcagaagccc
ccgtcatctctttggggtagtggtgcaccccgtttcagcagagggtggggtgtgcaggac
tcgcgatatgccctgagttcaaactggggtgatggcagttcgggtggatctgttcgggtc
agctcctggcttcttcttcataatctcactccacagatcgatggctccaccctgcgaaca
atctgcatgcagcatggcccgctgataacattccacctgaacctgacacacggcactgca
ctggtccgatacagcaccaagcaagaggctatcaaggcccagactgcgctgcacatgtgt
gtgttggggaacactaccatccttgctgagttcgtcagtgaagaggaagtcaaccgctat
tttgcacaaggtcagttatcaacaccatccccaggctggcagacactggagacaggacag
agccagatggatccagttgggagcagccttcactcgtttggcgggcggtctggcctggga
cagtggaacagtgccggaggagtgggcaggggtagcgggaacctggcaggagcctcactt
tgggcaaccccaagctacacggcaagcttgtggggagccccgaattccgatgattcgcac
cgaatgggcagtccggcccccctactacctggtgacctcctgggcggaggggctgattca
atttga |
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