Hemiscyllium ocellatum (epaulette shark): 132832104
Help
Entry
132832104 CDS
T09720
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132832104 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132832104 (hbs1l)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132832104 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GIP1_N
Mg296
Motif
Other DBs
NCBI-GeneID:
132832104
NCBI-ProteinID:
XP_060705793
LinkDB
All DBs
Position
3:complement(48878044..49050669)
Genome browser
AA seq
683 aa
AA seq
DB search
MARHRNVRGLKYDEDFEDDDVYGQSVEDDYCISPATAAQFIYKRDDYNRRAFTEEPLEEG
DEYAEDKLEEPFYGNQPLLSEVDQARLHSCLDKMREVLGESVSDQVMVNAVLNSQYDAHK
ALDLLLSEDCQQKTKLKMQSTNPTRKSTVGKAREQAARVDADIVPKVAKMTVSGKQITGF
NIPSANVDENDHLRKGVVSEEISSLTVLEASSKSNSTAYVAPSFEEATVVQTPSKVSVKA
RQQIDVKAELEKRQAGKQLLNLVVIGHVDAGKSTLMGHLLYLLGKVNKRIMHKYEQESKK
AGKASFAFAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQ
ADVAILVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVVVNKMDQVNWQPERFKEI
SNKLGHFLKLAGFKDSDVAYIPTTGLNGENLTTRSQIPELKAWYNGPCLLEQIDSFKSPQ
RPVEKPFRLCVADVFKDQGSGFSITGKIEAGYVQTGDRLLVMPPNETCTVKGIALHDEPL
DWAAAGDHVTLTVTGVDIIKINVGCIFCDQKIPIKTCMRFRARVLIFSIDIPITQGLPVL
LHYQTLSEPCTIRRLVSVLHKSTGEILKKKPKCLTKGQNALIELQAQRPIPLELYKDFKE
LGRFMLRYSGSSIAAGVVTEIKE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcatagaaatgtccgcggactaaagtatgacgaagactttgaagatgatgat
gtctatggccagtctgtagaggatgactactgcatttctccagcaacagctgctcagttc
atttataaacgagatgattacaacagaagagcctttaccgaggaacctctggaagaaggt
gatgaatatgcagaagataaattggaggagcctttctacggtaatcagccattactaagt
gaagttgatcaagctcgtcttcattcctgtttagataaaatgcgagaagtcttgggggag
tctgtatcagatcaagtcatggtcaatgctgtgctgaatagtcagtatgatgcacataaa
gccctagaccttctgctatctgaggactgccaacaaaaaacaaaattaaagatgcagagt
acaaaccctacacggaaatccacagtaggcaaagcaagggagcaagctgcaagagttgac
gctgatatcgtgccaaaagtagcaaaaatgacagtatctggaaaacaaataacaggcttt
aatataccaagtgcaaatgttgatgagaacgaccacttgcgaaaaggtgtagtctctgaa
gagatttcttcacttacggtgctggaggcttcatccaagtcaaattcaacagcttatgta
gccccttcatttgaagaagcaacagtggttcagactcccagtaaggtctctgtcaaagca
agacagcagattgatgtgaaagctgagcttgaaaagaggcaagcagggaagcagctgctc
aaccttgttgtgataggccatgttgacgctggcaaaagtactttaatgggtcatctactt
taccttctgggaaaggtaaacaaacgtataatgcacaaatatgaacaagaatcaaaaaaa
gcaggaaaagcgtcctttgcctttgcttgggttttggatgagacaggtgaagaaagagaa
agaggtgtaacaatggatgttggaatgacaaaatttgaaacaaagaccaaagtaatcaca
ctaatggatgcaccaggtcacaaagacttcattccaaacatgattacaggtgctgcacag
gctgatgtagcaatcctcgttgtggatgcaagccgaggagaatttgaggctggatttgag
gctggtggacagactagggaacatgcgttgctcgttcgttctcttggtgtaacacagtta
gctgttgttgttaataagatggatcaggtgaattggcaacctgaaagattcaaagagatc
tctaataaacttgggcatttcctgaagctagcaggctttaaggattctgatgttgcttac
atccctacaacaggactgaatggcgagaatctaaccactagaagtcaaatacctgaactc
aaagcctggtacaatggaccttgtttgttagagcagattgattctttcaagtcaccacaa
agaccagtggaaaaaccatttaggttgtgtgtggctgatgtttttaaagatcaggggtca
ggattcagcattactggtaaaattgaagcagggtatgtacaaacaggggatcgactgctg
gttatgcctccaaatgaaacttgtactgttaagggaattgccttacatgatgagccgctt
gattgggcagcagcgggagatcacgtcactctcacagtgactggtgtggacattataaaa
ataaatgtcgggtgtattttttgtgatcagaaaatacctataaaaacatgcatgagattt
agggctcgagttcttattttcagtattgatattccaatcactcaaggtttaccagttttg
ctacactaccaaaccttaagtgaaccatgtacaatcagaaggctagtgagtgtactgcat
aagagtaccggagagattctcaagaaaaagcccaaatgtttgactaaagggcagaatgcc
ttgatagagctgcaagctcagagacctatccctctggaactttacaaagacttcaaggag
ctgggtcgttttatgttacgatatagtggatccagtatagcagcaggagtagtcacagag
ataaaagaataa
DBGET
integrated database retrieval system
