Hemiscyllium ocellatum (epaulette shark): 132832170
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Entry
132832170 CDS
T09720
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hoc03016
]
132832170 (cdkal1)
Enzymes [BR:
hoc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
132832170 (cdkal1)
Transfer RNA biogenesis [BR:
hoc03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
132832170 (cdkal1)
Prokaryotic type
Methylthiotransferases
132832170 (cdkal1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
132832170
NCBI-ProteinID:
XP_060705903
LinkDB
All DBs
Position
34:13369722..13951340
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AA seq
569 aa
AA seq
DB search
MPAACDSLVEDIEDIVSAQDPKPHDQQFAKRSIVPHVRKRKKHQQDEGTDDVQADSVIPG
AQKIWVKTWGCSHNSSDGEYMAGQLAVYGYKITDNSSDADLWLLNSCTVKNPAEDHFRNT
IKKAQEQNKKVVVAGCVPQAQPRMDYIKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDKGKRLGGARLDLPKIRKNPLIEIISVNTGCLNACTYCKTKHARGELASYSVAELVDRA
IQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
KEMAKILHHPRVYSFLHVPVQTGSDSVLMDMKREYCIADFKLVVDFLKKQVPGITIATDI
ICGFPGETEADFQETLKLIQEYKFPSLFINQFYPRPGTPAAKMEQVPAQVKKQRTRTLSQ
LFQSYTPYDHKIGEKQHVLITEESFDGQYYVAHNKFYEQVLVPKQPELLGKMIEVDIYEA
GKHFMKGKPAQNGKIYTPSIVKPLLRGAVSGVMEEFKTINENAHYRWSSEKSVSASLLPW
NLKCPRVKIVSLSLAVLAVIMAVTIAIFR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgcttgtgattcattagtggaagacatcgaagatattgtgtcagcacaagat
ccgaaacctcatgatcaacagtttgcaaaacggagcattgtcccacatgttagaaagaga
aaaaaacaccagcaggatgaggggacagatgatgtacaggctgatagcgttatccctggt
gcacagaagatctgggtgaaaacctggggctgttcacataacagttcagatggggaatat
atggcaggtcaactggcggtttatggatataagattacagataattcatctgatgcagat
ttgtggctgttaaatagttgtactgtgaaaaatccagctgaagaccactttaggaacaca
attaaaaaagctcaagaacaaaataaaaaagtagtagttgctggatgtgttcctcaagcc
caaccacggatggactacattaaaggcttgagcattattggggttcaacaaatagatcgt
gtcgttgaagtcgttgaagaaacaattaaaggtcattctgtgaggctactgggtcagaag
aaggataagggtaaacggttggggggagccagactagatttgccaaagataaggaaaaac
ccgctgatagaaatcatttctgtgaacactgggtgcctgaatgcttgcacgtactgcaaa
accaagcatgcaagaggagagctggccagttactcagttgcagagctagtagacagagcc
atacagtcattccaagaaggtgtctgtgaaatatggctgactagtgaagacacaggggcg
tatggaagagacattgggacagaccttccaacactgctttggaaactggtggaagtaatt
cctgagggagcaatgctgaggcttggtatgaccaatcctccatatattttagaacatctg
aaggaaatggcaaaaattctccaccatccaagggtttattccttccttcatgtgccagtt
cagactggatcagatagcgttcttatggacatgaagagagagtactgcatagcagacttt
aagttggtagtagacttcttgaagaagcaggtgccagggattacaattgccaccgacatt
atctgtggttttccaggtgagacggaagcagactttcaagaaactctgaaactaattcag
gagtataaatttcctagcttgttcatcaatcagttctacccacgcccaggcaccccagct
gcaaagatggaacaagtcccagcccaagtgaaaaaacagagaacaaggacactgtcccag
ctatttcagtcctatactccatatgatcataagattggtgagaagcagcatgttctgata
acagaagaatcatttgatggccaatattatgttgcacataacaaattttatgagcaagtt
ttggtgccgaagcaacctgaactactgggcaaaatgatcgaggtagatatttatgaagca
ggcaaacattttatgaagggaaaaccagcacaaaatggaaagatctacactccttcaatt
gtgaaaccattactaaggggtgcagtatcaggggtgatggaggaatttaagaccattaat
gagaatgcacattaccgctggagcagtgagaagtccgtcagtgcaagcctgttgccttgg
aacctgaaatgcccaagagtaaagatagtgtctttaagcctggctgtgttagcagtgata
atggctgtaactatagcaatattcagatag
DBGET
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