Hemiscyllium ocellatum (epaulette shark): 132832250
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Entry
132832250 CDS
T09720
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04621
NOD-like receptor signaling pathway
hoc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
132832250 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132832250 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hoc04054
]
132832250 (nod1)
Pattern recognition receptors [BR:
hoc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
132832250 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
CARD
NOD2_WH
LRR_4
HTH_MCM7
AAA_16
AAA_22
PIF1
NPHP3_N
AAA_18
AAA_30
nSTAND3
Motif
Other DBs
NCBI-GeneID:
132832250
NCBI-ProteinID:
XP_060706064
LinkDB
All DBs
Position
34:complement(24562577..24624411)
Genome browser
AA seq
945 aa
AA seq
DB search
MDTVFQPGLDQVSIVSAHSFTKLLKVHREVLVGCIKNTECVLKNLIKHEYISTEEAELSQ
QHPTQAAKVRKILDLVESKGEETAEYFIHILHQANEIYTDLSPWLKEIEYQPSEYILGKS
VIITDAVCQYIQKIKHDLRQDTKFVTSYVQKEDILLDDTYTETLMELINGVNETKGTISN
LEDLFSDTGVINEDADTVFVTGDAGVGKTILLQRLQNLWSKGELCANVKFFFKFRCRIFN
SFREEDKISLRDLLFKYNCYPDKDTDEIFSYIRQHPDSVLFTLDGFDEISVDCDLSDIPD
VSSPFDPTHPITLLMNLLRGKLLKGSKKLLTARTGTNLPLRMVRKRVTLKGFTKDHLLQY
LKKFFKNQPHQTLVLTQLEANPHLCSLCSVPLFCWIIFKCYKHLQSECNSQHMLDYVTLT
DIYLLMLEVFLNRSSKTRLNKRNKSQNETFKAKKDSLMRLGKLAKEGIESNNFIFSQEQI
TAAGISEEDLQLGFIKSAGHYDGCGNQSTYEFLHLTLQSFFTAFFLVVNERIRAKEIITF
FSKCDHYLTGPQANIVFLRCLGYKSHHRKDPFETNEHLQFTTLFLCGLLCKAKRDLFKQL
SSAGSIQRKRSALKTYLADCVKSHLKNLPQGPFEEFCRVQALPRFVWLMRYIFETQSEAV
ASLAAKGICADYIKLTFCNAFSADCSAIANILRHRKKSIALELDNNNINDYGVKELIPCF
DKLTVVRLSVNQVTDDGAKVLAEELLKYKIIKILGLYRNQITDVGARFIAQIVEECPYLR
TLKIGLNKLTSEGGKLLAQAIQKSKAIKDVGMWGNQIGDVGAAAFAEAIRNHPSLKELSL
AANRISAEGGKSLAAALQDNRCLEIFWLTENQLNDEAAALFAEALRVNKSLLHLWLINNR
ITEVGANCFFKILKENATIEEICLNGNNISAEGAKRLAEEPRILL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggatacagtgttccagcctgggttggatcaagtgtcaatagtatcagcacactcattt
accaagttgctgaaggtgcaccgagaggtcttagttggttgcatcaagaacacagagtgt
gtgctgaaaaacctgataaagcatgaatacatttccactgaagaggctgagctgtcccag
cagcatcctacgcaagcagcaaaggttcgaaaaatattggatctggttgagagcaaagga
gaagaaacagcagagtatttcatacacattctgcaccaggccaatgagatttacacagat
cttagcccatggctgaaagaaatagagtatcaaccatcagaatacatactaggcaaatca
gtaattatcacagatgctgtctgccagtacattcaaaagattaaacatgacctacggcag
gacacaaagttcgtcacttcatacgtccagaaagaagacatcttgctggatgatacttac
accgagacacttatggaactaatcaatggagtcaatgaaacaaaaggaactatttccaac
ttggaggatttgttcagtgacactggagtcatcaatgaggatgcagacacagtgtttgta
actggtgatgctggggttggaaagaccatactgcttcagagacttcagaacctgtggtcc
aaaggagagctctgtgctaatgttaaattctttttcaaatttaggtgccgaatattcaat
agctttagagaggaagataagatttctctcagagatttactgttcaaatacaactgttac
cctgacaaggacactgatgagatatttagttacatccggcaacacccagactctgtcctc
ttcacactggacgggtttgatgaaattagtgttgactgtgaccttagtgatatccctgat
gtctcttcaccctttgatcccacacatcctatcaccctattgatgaaccttctccgagga
aagttattaaaaggttccaaaaaattattgactgcaagaactggtacaaacctaccattg
agaatggtgagaaaaagagtgacactgaagggctttacaaaggaccatttattacaatat
ttaaagaagttcttcaaaaaccaaccccatcaaactttggttttgacccagttggaagca
aaccctcacctttgtagtttatgttcagtgccattgttttgctggattatatttaaatgt
tacaaacacttacagtcagaatgtaattctcagcatatgttggattatgtaacgttgact
gacatctacctattgatgttagaggttttcttaaaccgttcttccaaaacgaggttgaac
aaaagaaacaaaagtcaaaatgagacattcaaagcgaagaaggattctttgatgaggttg
ggaaaattggcaaaagagggaatcgaaagcaataacttcatctttagtcaggagcaaatc
acagcggctggtatctcagaggaggatttacagttgggttttatcaagagtgcaggccac
tacgatggatgtgggaaccaatcaacctatgagttccttcatctgaccctccagtcattt
ttcaccgcatttttcctggttgttaacgaaagaattcgagcgaaggaaatcattacgttt
ttttcaaaatgtgaccactatttgactgggcctcaagccaatattgtttttttgagatgt
ttgggttataagtcacatcacagaaaggacccatttgaaacaaatgaacacctgcagttc
accacacttttcctctgtggcctattgtgtaaagctaagagggacttattcaaacagtta
tcttccgcagggagtatccaaagaaagcggtcagcactcaagacctaccttgccgactgc
gtaaagtcacacttaaaaaatctacctcaagggccatttgaagaattttgtagagtgcaa
gccttgccccgatttgtctggttaatgcgctacatttttgagacccagagtgaagctgta
gccagtcttgcagcaaaggggatttgcgcagattatatcaagctcactttctgcaatgca
ttctctgctgactgcagtgcaattgcaaacatattacgtcatcgtaaaaaatcaattgca
cttgaactggacaacaataatatcaatgactatggagtgaaggaactaattccttgtttc
gataaactcactgtagttaggttgagtgttaaccaggtcacggatgatggagctaaagta
cttgcagaggaactcctaaagtacaaaattattaagattcttggcctgtacagaaatcag
atcactgatgttggtgcccggtttattgcccaaattgttgaagaatgcccatatcttcga
acattaaaaattggactcaacaaacttacaagtgaaggagggaaattattagcacaagca
attcagaaaagtaaggccatcaaagatgtcgggatgtggggaaatcagattggagatgtg
ggtgcagctgcttttgctgaagcgataagaaaccatccttcattaaaagagctcagcctg
gcagccaatagaatttcggcagagggtgggaaaagtttggcagcagctctgcaagacaat
agatgcttggagatattttggttgacagaaaaccaattgaatgatgaagcagccgcatta
ttcgcagaagcactcagggtcaacaaaagcttgcttcatttatggttaataaacaacaga
attacagaggtgggagcaaattgtttcttcaagatactcaaagaaaatgcaacaatagaa
gagatttgcctgaatggtaataatatctctgctgaaggagctaagaggctcgctgaagaa
ccaaggattttgctgtga
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integrated database retrieval system
