Hemiscyllium ocellatum (epaulette shark): 132832261
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Entry
132832261 CDS
T09720
Name
(RefSeq) partitioning defective 6 homolog gamma-like isoform X1
KO
K06093
partitioning defective protein 6
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04144
Endocytosis
hoc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132832261
09144 Cellular community - eukaryotes
04530 Tight junction
132832261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hoc03036
]
132832261
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
132832261
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
132832261
NCBI-ProteinID:
XP_060706081
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All DBs
Position
34:9218322..9269976
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AA seq
379 aa
AA seq
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MSRSYNKSGTLRCLDRVAVEVKSKFGAEFRRFSLSRYKPGKFAEFYSLIIHTHNILNMDI
LIGYADVHGDLLPINNDDNFCKAISMANPLLRIFVQRKEEVDYNLFGTDSLTRKKKPLGG
LRNDTLRKRVQLSISIPQDFRPVSSIIDVDILPETHRRVRLYKHGCEKPLGFYIRDGTSV
RVTAHGLEKVPGIFISRLVPGGLAESTGLLAVNDEVLEVNGIEVMGKTLDQVTDMMIANS
HNLIITVKPVNQRNNVNRSSRMSGSSGHSNDSTASHHSLPSAHMVQNYNPEDESDEEADI
IIEGCIEPQSISFKSPSSSFTSSRNNLSQRRQKELPLNGSVRKTNGSILKTLSALKAEAR
HSLAFSRGGIEEDGTVITL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaagttacaacaagtccggcacgctgaggtgtttggatagggtggcggtggaa
gtgaagagtaagtttggggcagaatttcgaagattttccctcagccgctataaacctgga
aagtttgctgaattctacagcctaattattcatacacataacattttgaacatggatata
ttaattggatatgctgatgtccatggtgacctgctgccaatcaacaatgatgacaacttc
tgcaaagccatttccatggcaaatccattgctaaggatttttgtacaacgaaaagaagag
gtcgactacaatctctttggcacagattcattgacgcgaaagaaaaagcctttgggaggt
ctccgtaatgataccctccgaaaacgagttcagctcagcattagtattcctcaagacttc
aggcctgtttcttccattattgatgtggatattttgcctgaaactcaccggagagtccga
ttatacaaacatggatgtgaaaaacctttagggttctacatacgagatggcacaagtgtg
agggtgacagctcatggactagaaaaggttccaggtatcttcatctcacggcttgtacct
ggtggtttagctgaaagtacaggcctccttgctgttaatgatgaagtcctcgaggtgaat
gggattgaggtgatgggtaaaacgcttgatcaagttacagacatgatgattgcgaatagt
cacaaccttatcattacagtaaagccagtgaaccagaggaacaatgtcaaccgcagcagt
cgtatgtctggtagctctggccattccaatgacagtacagccagtcatcatagtctgccc
tctgcccatatggtgcagaactataatcctgaagatgaaagtgatgaggaagctgacatt
attattgaaggctgtattgaaccacagagcatttcatttaaatcaccatcttcctccttc
accagttctcgaaataatctgagtcagagacggcagaaggagctgccactcaatggctcc
gttagaaaaactaatggaagtatacttaaaacattgagtgcactcaaagctgaggcaagg
catagcctagctttcagtagaggaggcattgaagaggatggaacagtgattacactttga
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