Hemiscyllium ocellatum (epaulette shark): 132832352
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Entry
132832352 CDS
T09720
Name
(RefSeq) cadherin-20-like isoform X1
KO
K06807
cadherin 20, type 2
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hoc04515
]
132832352
Cell adhesion molecules [BR:
hoc04515
]
Cadherins
Major cadherins
132832352
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
132832352
NCBI-ProteinID:
XP_060706274
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Position
34:complement(41635145..41686349)
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AA seq
746 aa
AA seq
DB search
MHYRVKRGWVWNQFFVLEEYTGSEPLYVGKLHSDMDKGEGSVRYILSGDGAGTVFTIDDN
TGDIHAVQRLDREEKTHYTLRAQALDRWTGRPMEPESEFIIKIQDINDNEPKFLDGPYVA
SVPEMSPMGTSVIQLTASDADDPTYGNSARVVYSILQGQPYFSVEARTGIIRTALSNMDR
EVKDGYQVVVQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPHRLYQMTVLETGLVGSA
VGRILAEDADEGINAELSYRIIDGDRMNTFDIVTDNSNQVGIIILKEPLDFETKDSYTLT
VEGTNTHLDLRFLNFGPFRDTTRVVVSVEDVDEPPQFEISFYQVEVYEDVAVGTTIQTVS
AKDPDAANNSIRYSIDRSTDPTRFFFIDIASGALMIAKPLDREQFSWHNITVLAMEMKNP
TQIGSVSVTVKVLDINDNAPEFVKDREAYICENAKPGQLIQMVSAVDLDNPQGGHHFYYS
LAPEAASNPNFTVRDNQDNTAWILTRRAGFKHQEQGTYYLPILIADSGLPMQSSTSTLTI
RVCGCDPDGNVRSCSVEAYSLPISLSRGALIAILGCIFIMLVLVLFILTLRRHKKNSLIV
DDEENVHENIVRYDDEGGGEEDTEAFDIAALWNPREVQISKSRRDMLPEVQSVSRYISQS
RAGSSNVNSYILAKLHDANTDPSAPPFDSLQTYAFEGNGSVAESLSSFESGSTDSDLNYD
YLTDWGPRFKKLADLYGGSQGVEDYL
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcattatcgtgtgaagagaggttgggtatggaaccagttctttgtgttagaggaatac
actggatcagagccactatatgtcggaaagcttcattccgacatggacaaaggagaaggc
tctgtcaggtacatcctgtcaggtgatggagcgggtactgttttcaccattgacgacaac
acaggtgacattcatgctgtacagaggctagatcgtgaggagaagacgcattacacctta
cgggcacaggcgttagacaggtggactgggaggccaatggaaccagagtctgaattcatc
atcaagattcaggatatcaatgacaatgagccaaagtttcttgatggaccctacgtggcc
agtgttcctgaaatgtctccaatgggtacgtctgtgatacagctcacagctagtgatgct
gatgaccccacatatggaaacagcgctcgagtggtgtatagcatcctgcagggacagcca
tacttctccgtggaagcaagaacaggtatcatcaggacagcattgtcaaacatggaccgc
gaggtaaaggatggataccaagtggttgtacaagcaaaggacatgggtgggcagatggga
ggattatcagggacaacaactgtgaacatcacactcacagacgtcaatgacaatcctccg
agattccctcacagattatatcagatgacagtgctggaaactggattggttggctcagca
gtgggaagaattcttgctgaagatgcagatgaggggatcaatgctgaactgagctaccgg
atcatcgacggagataggatgaacacatttgacattgtcactgataatagcaaccaagtt
gggattatcatcctcaaggagcctttagattttgaaacgaaagacagctacacattaact
gtggaaggaactaatacacacctggacctgcggtttctaaactttggtccattccgtgat
acgaccagggtggttgtatcagttgaagatgtggatgagccaccacagtttgagataagc
ttctaccaggtggaggtttatgaagatgtcgctgtcggtacgaccatccaaactgtttcg
gcaaaagacccagatgcggccaataattccatcagatattcaattgaccgatccactgat
cccacaagattcttcttcattgacatagcatccggagctttaatgattgcaaagccattg
gaccgagagcaattctcatggcataacatcacagtcctggcgatggaaatgaagaacccc
acacagattgggagtgtttctgtcacagtgaaagtcctcgatattaatgacaacgcaccc
gagtttgtgaaggatcgtgaggcctatatctgtgaaaatgccaaacctggtcagctcatt
cagatggtcagtgcagtggacctggataatcctcaaggaggtcatcacttctactacagc
ttagctcctgaagcagcaagcaacccaaacttcactgtgcgtgacaatcaagacaatact
gcctggattctgaccagaagagctgggttcaaacaccaggagcagggaacctattacctg
cccattctcatcgctgactctggtcttccaatgcaaagcagcaccagcactctgacgatc
agagtgtgtggctgtgatcccgatgggaatgttcgatcctgtagtgtcgaggcctacagt
cttcccatcagcctgagcagaggagcacttatcgccattctcggatgtatcttcatcatg
ctggtgttggtgttatttattctaacattgagaaggcacaagaagaattccctgattgtc
gacgatgaagagaatgtccatgaaaatattgttcgatacgatgacgaaggtggtggggaa
gaggacactgaggcctttgacattgctgccttgtggaatccaagagaagttcagatctcg
aagtctaggagggatatgcttcccgaagtccagagtgtctccagatacatatcgcagtcc
agagcggggagcagcaacgtgaacagctacatcctggcaaagttgcacgatgccaacacg
gacccgagtgcccctcctttcgattccttgcagacttacgcatttgaggggaatggttcg
gtggcagaatcgctgagctccttcgagtcgggctcgacagactcagacctcaattatgat
tatctcaccgactggggcccccggttcaagaagctggccgatctgtatgggggctcgcag
ggcgttgaagactacttgtag
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