Hemiscyllium ocellatum (epaulette shark): 132832589
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Entry
132832589 CDS
T09720
Name
(RefSeq) collagen alpha-1(X) chain-like
KO
K19479
collagen type X alpha
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
132832589
NCBI-ProteinID:
XP_060706662
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Position
3:64692286..64702298
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AA seq
671 aa
AA seq
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MDSKQICAVLLLLSVTLVHGTGFNRYAYIRKNVKSHGDYNVKAYDSQNSEDEGYEDNDES
RDVGAERGLQGPPGPRGPPGPPGKTGVGMPGAPGKPGMPGAPGLPGMGKPGMPGAPGKSG
ERGAPGPKGDRGSQGMPGSKGNPGAPGYPGPAGLAAVGKPGPQGLPGAPGAPGRPGEKGM
PGHMGLPGAKGEKGVGLPGRPGGRGATGPQGPPGSPGPVGLGSAGAPGRPGQPGEKGAMG
PPGAPGYAGAPGPKGPPGNPGLPGRGKPGAPGEAGLPGAPGNKGNPGPQGLPGAPGLPGF
GKPGIPGLKGEPGSVGPVGYPGEKGEAGPTGAPGQRGAVGPVGSPGPQGARGPPGATGAP
GEKGESGPAGARGYPGPKGETGPGGAPGKSGAPGLPGRPGSQGPVGAKGSMGGPGGPGKS
GSPGPPGPQGPPGYPGEAGSRGSTGSPGPRGPPGSPGSQGFSGEKGDPGPPGPPGPPGNF
YGKMASGSPGAPGLKGPPGPPGQPGLPGPPGPPAEMIMSPGKYDYSGYIKSGEPSAGLLS
PYPAFTAILSHSYYPAGQAIAFDKILTNSNNNYDPSTGIFTCEISGIYQFNYQIQVKGAN
VWVGLYKNDEAVMYSYDDYTEGYVDQVSGSVTLYLHENDQIYVQLPTEESNGLYSSDLMY
SVFSGFLIVHS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggattccaaacaaatctgtgctgttctgctattactatctgtcactctggtccacgga
acaggatttaatagatatgcctacataaggaaaaatgtaaaaagccacggagattacaat
gtaaaagcatatgattctcagaactctgaagatgagggatatgaagacaatgatgaaagc
agagatgtaggagcagaacggggcctgcaaggtcctcctggaccacggggcccaccagga
cctcctgggaaaacaggcgttggaatgccaggtgccccaggcaagcctggaatgccagga
gctccaggattgccaggaatgggaaaaccaggaatgccaggtgcaccaggaaagtcaggt
gaaagaggagctccaggaccaaaaggcgatagaggatcacaagggatgcccggatctaaa
ggcaatccaggagcaccaggatatcccgggccagcagggctggctgctgttggtaaacca
ggtccacaaggactaccaggtgctccaggggcaccaggtagacctggagaaaaaggaatg
ccagggcatatgggtcttcctggagcaaaaggggaaaagggagttggacttcctgggcgt
cccggtggcagaggggcaacaggaccacaagggcctccaggatcacctggaccagtcgga
ttaggaagtgctggagcacctggccgtccgggtcaaccaggtgagaaaggtgcaatgggc
cctccaggtgcaccaggatatgcaggtgccccaggcccaaaaggaccacctggaaatcct
ggtcttccaggacgtggaaaaccaggagcgccaggtgaagccgggttgcccggagctccc
ggaaacaaaggtaatcctgggccacaaggtttaccaggtgcacctggactgccaggtttc
ggaaaacccggtatacccggactcaaaggagagcctggttctgtgggtcctgttggttat
ccaggagagaaaggagaggcaggaccaactggggcacctggacagcgtggagctgttggg
ccagtaggttcgcccggaccacaaggtgccaggggcccaccaggagctaccggtgcacca
ggagagaagggggaatcaggccctgctggcgcccgtggttacccagggccaaagggtgaa
acaggccctggtggtgccccaggtaaatcaggagctccaggactaccaggtagaccaggt
tcacaaggaccagttggtgcaaaaggtagcatgggaggtcctggcggaccaggtaaatca
ggaagtcctgggcctccaggtcctcaaggaccaccaggttatcctggtgaggccggatca
agaggaagtacaggatcacctggtccaagaggtccacctggctctccaggttctcaaggg
ttttcaggggaaaagggagatccaggccctccaggtccaccaggtcctcctggaaatttc
tatgggaaaatggcaagtggctcaccaggtgcaccagggctgaaaggtccacctggacct
ccaggccaaccaggccttcctggaccaccaggcccaccagcagaaatgatcatgtcccca
ggcaaatatgattatagtggctacatcaaatcaggtgaaccctcagctgggttactcagt
ccatacccagcttttacagccattctttcccattcgtattacccagctggacaagcaata
gcatttgacaaaatactgaccaattcaaataataactacgatccatcaaccggtattttc
acatgtgaaatatctggcatctatcaatttaattatcaaatacaagttaagggagcaaat
gtttgggtcggattatacaaaaatgatgaggctgtgatgtactcatatgatgactataca
gaaggttacgttgatcaggtctcaggtagtgttacattatacctacatgagaatgaccaa
atctatgtacagttacctacagaagagtctaatggcttatattcttctgacctcatgtat
tcagtattctcagggtttctaattgtccattcatga
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