Hemiscyllium ocellatum (epaulette shark): 132832661
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Entry
132832661 CDS
T09720
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04510
Focal adhesion
hoc04512
ECM-receptor interaction
hoc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132832661 (lama4)
04518 Integrin signaling
132832661 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132832661 (lama4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_II
Laminin_I
EGF_LMN_ATRN
Laminin_G_3
TBCA_PH
DUF1465
Motif
Other DBs
NCBI-GeneID:
132832661
NCBI-ProteinID:
XP_060706725
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All DBs
Position
3:67769804..67954682
Genome browser
AA seq
1907 aa
AA seq
DB search
MAWISPWLCTFSLTALGLFYPATGSGESSGLSISAEDNIMGKSTNLEAIHPRGRQNLYSE
NCATGFYGTTDGACLPCNCHGHSEQCLDDSGICINCQNNTTGDHCEKCLDGYIGDVVQGH
HKSCQPCPCPMSIPSNNFAVSCKIKANKLRCFCQENYAGPRCERCAPGYYGTPMLYGSSC
RKCNCNGNSDPNLIFEDCNEETGHCRNCLRNTTGIHCEHCAPGYYGDAITAKNCTDCPCQ
KCGTDECDHATGQCRCKPGVSGAFCDRCEIGYYGYSSCSGCLRCECALASKDEYCDPLSG
RCRCLPGVTGKRCDRCLYGFWNYGQNGCQRCNCEGQCDSETGECLSAPTESPTDCSVVRC
DKCVWDLIEDLKLSGASLGEARLSVLNVITGDAINNRLQEFNITAIHFNMQIADMLSQSE
SKKLQIEDIEAAMVDFIADLNMLSEKENITISNAQLFNKETAKISDRANQINGQINDIAD
LVQDIIEGLNKYGIEKELSAEEVNKSFHEANQMLDELRNRNFSNQKPLTEEERTQARNLL
NRVHGFYNKLMEANSSIRKIQENITKYNNDVLDLKEALEDAIKTVQQTEEKNEENINGYK
RKERLQKVLNKHFAAVNVTLITASNSLIDTEIAISELENKIVNLSTFHASIDGAQNLLRD
KLTNLSTYDKSLVLRAIDYAEQLRKLASELANILKSIDANGIVQKAINASNVYDNIVQYV
AEAEENATTLLNAAQRAEDAVEGIQTQSTWLRNSSEALLKKVRELDATMYDNDKTTFQDT
RRHVDAVIGKKNYTVNRLQNAVNQLALIEPSNKNRFNQSKLIAEEAKDTAEMVLQAVNDM
DEFLKGWPQNISASAEDGTAFKKTVSSAGDSVKNLTEIVPKLLDKLRIVEQKKPASNISA
SILRIRELIAQTRNVASKVQVSMKFDGQSAVELHPKANLEELKSFTSLSLFMRVPSLSEQ
AQDANKDRFIMYLGNKNGRQDYIGLCIKNDNLVYVHNLGNGDVEIPLNSKPVSTWPNYFN
LIKVERVGRHGKIQLTVPSPGSTEEQKFIQKGASEGNDSLLDLEADNMVFYLGGVPPDFQ
LPASLNFPGFVGCIELATLNDDIISLYNFKRTYNLNTTAERPCTRYKLAFAQSRTANFYF
DGSGYSFVRNIQRRGKFNIATRFNLDIRTPADNALLLLMVKGNTFFSMEMQNGYIRLVYD
FGFSKGPVVLEDTDKKKRINDAKYHEVSFIYHNYKKMILLIDRINVKSVENEKKSMYFTD
VYVGGAPDQVLSSLKSYVATDAGFRGCLRSFQFQRRDFNVLEEDETLGISNGCPEESLMS
RMAYFNGQGFISSSEKITPFSNFEGGFNFRTLQSNGLLFYYSEGPDIFSLSLNNGTIIFK
MKEATMQSTKKQYNDGWNHFIRATVSPSSCQLIVDDEDQTTVDCSTEESVYPKGKFYFGG
SVHDQYVNFTGCISNAYLSRTEKDIAVEDFQTYAEKVQASLHGCPAETHPAAIIQKHQKY
VAKAKRGRGRKVNSGTAELRKVSVVHSGKTKENVLHEESRCYLPTHPKTIQHAHQYGGIP
NSRQEIFGIPEYFNHKSHFSVSIRTKSSHGLIFYVANKEEDQFMTLFIARGHLIYSFSNG
REKLKLRSLEKYNDGLWHNVIFTHENNKGRLIIDGLHILEGSLISPVYPWNITEPFYVGG
VPLGKAAKNIQVKSIQSFNGCLRNFQLNRQRLLPASQTFGVTPCFEGPTESGTYFSTEGG
YVILDDSFNLGLQFELVFEIRARNHSGILLHIHSYNRKYLNLFMEYGQVILKVSNGTAEF
KTSVSPKQSLCDGRWHRIAVIRASNVVQLDVDSEVNHLVGPITSRSFSPKEPVFVGGVPE
SLLSSRLSMRQSFTGCMRNFNINETPVIFAKAALVSGGVSINSCPAV
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atggcttggatttcaccctggctgtgtactttctccctaaccgccctgggattgttttat
ccagctactggctctggggaaagcagcggtctatccatcagcgcagaagataatatcatg
gggaaatctaccaaccttgaagccattcatccaaggggaagacagaacttgtacagtgag
aactgtgccacggggttctatggcacaactgatggagcatgtttaccttgtaactgccat
ggacattcggagcagtgccttgatgattctggaatctgcattaactgtcagaataataca
actggggaccactgtgaaaaatgtcttgatggatatattggtgatgttgtccagggtcat
cataagtcttgtcagccttgtccctgccctatgagtattccttcaaataattttgctgtt
tcctgtaagattaaagccaacaaattacgttgcttctgtcaggaaaattacgctggaccc
agatgtgaaagatgtgctcctggttactatggaacaccaatgctgtatggaagtagttgc
agaaaatgtaactgcaatggtaattctgatcccaatctcatatttgaagactgcaacgag
gaaactgggcattgccggaattgtctgcgaaatacaacgggcatccattgtgaacactgt
gcaccagggtactatggagatgctattactgctaaaaattgcacagactgtccctgtcag
aaatgtggcacagatgaatgtgatcatgctactgggcagtgtcgttgtaagccaggagta
tcaggagccttctgtgaccgctgtgagattggttactatggatacagcagttgttctgga
tgtttgagatgtgaatgtgctctagcttctaaggatgaatactgtgaccctttgagtgga
cggtgtaggtgccttcctggagtcacaggaaagcgctgtgaccggtgtctgtatgggttc
tggaactatggacaaaatgggtgccagagatgcaattgtgaagggcagtgtgacagtgag
acaggagaatgtctgtcagcacctaccgaatccccaactgactgctccgttgtcagatgt
gacaagtgtgtctgggacttaattgaagacctaaaattatcaggagcgtcactaggagaa
gcaaggttgagtgttctaaatgtcattactggagatgccattaataaccgcttgcaggaa
ttcaatatcacagcgattcacttcaacatgcagattgcagacatgttatcacagtcagaa
tcaaagaaacttcagatagaagacattgaagcagctatggtggactttattgctgatctc
aacatgctgtctgagaaggaaaacatcaccatatcgaatgcacagctgtttaacaaagag
acagctaaaatcagtgaccgtgccaaccagatcaatggacaaattaacgatattgctgat
ttggtccaagatattattgaaggcctaaacaaatatggaattgaaaaagaactgtcagct
gaggaagttaacaaaagctttcatgaggcgaaccagatgttggatgagctgagaaaccgg
aacttttccaaccaaaaaccattgactgaagaagaaagaacacaagcccggaatttgtta
aatcgtgttcatgggttttataataagctaatggaagccaatagctcaattcgtaaaata
caggaaaatattaccaaatacaataatgatgtcttagacctgaaggaagcacttgaagat
gcaatcaagactgttcagcagacagaggagaaaaatgaagaaaacatcaacggttacaaa
agaaaagagagacttcaaaaagtattaaacaaacattttgctgctgtaaatgtgacgctt
ataacggctagtaatagcttgatagacacggaaattgctatatcagaactagaaaataag
attgtgaacttgtctacattccatgcctcgatagatggtgctcaaaacctactgagggat
aaactgactaatctctcaacatatgacaagtccctggttctccgtgctatagactatgct
gaacagcttcggaaacttgcatcagaattggcgaatattttgaagagtattgatgcaaat
ggaattgtccagaaggctataaatgcttcaaatgtctacgacaatattgttcaatatgta
gcagaggctgaggagaatgcaaccactttactcaatgctgcacagagagctgaggatgct
gtggaaggaattcaaacacagagtacctggctcagaaacagcagtgaggcgctgttgaag
aaagtgagggaactagatgcaaccatgtatgacaatgataagaccacttttcaggatacc
aggcgccatgtggatgcagtaattggcaagaaaaattacacagtaaaccgtttacaaaat
gctgtaaaccagttagcattgattgagccaagtaataagaaccggttcaaccaatcaaag
ctaattgcagaagaagcaaaagacactgctgaaatggtcctgcaagctgtaaatgatatg
gatgagtttttgaaaggctggcctcagaatataagtgcttctgctgaagatgggactgct
ttcaagaagacagtgagctcagctggtgactcagtgaaaaatttgacagaaatagttcca
aaactcttggacaaacttcgaatcgtggaacagaaaaagccagccagcaatatttctgcc
agtattctgcgaattcgagaactcattgcacagacacgcaatgtggccagcaaggttcaa
gtttccatgaaatttgatggccagtctgcagtggaacttcatccaaaagcaaacttggaa
gagctcaagtcttttacttcattgagtttgttcatgcgagttccttcattaagtgaacaa
gctcaggatgccaacaaagacagattcatcatgtaccttggaaacaaaaatggaagacaa
gattacattggtttgtgtattaaaaatgacaacttagtttatgtccacaatcttggaaat
ggagatgttgagattcctttgaactcaaagccagttagcacctggccaaactacttcaat
ttaatcaaagtagaaagagttggaaggcatggaaaaatacaactaactgtacctagccca
ggtagcacagaagagcaaaaatttatccagaaaggagcaagtgaaggcaatgattctcta
ctagatctggaagctgataacatggttttctatttgggaggtgtacctccagatttccag
ctccctgccagcttaaactttccaggcttcgttggctgtatagaactggcaacacttaat
gatgacataataagcctctacaacttcaaacggacatacaacctgaacacaacagctgag
cgaccctgtacaaggtacaagcttgcttttgcccaaagtagaacagcaaatttctacttt
gatggctcaggctattcttttgtgcgtaacatacaaaggagaggaaaattcaacatagca
actcggttcaatctagacattcgcacaccagctgacaatgccctcctgttactgatggtg
aaagggaatacgttcttcagtatggaaatgcaaaatggttatatacgcttggtttatgac
tttggattcagcaaaggccccgttgttcttgaggatactgataaaaagaaacgtataaat
gatgcaaaatatcatgaggtctcattcatttaccacaactataagaagatgatcctattg
attgacagaatcaatgtaaaaagtgttgaaaatgaaaagaagagcatgtattttacagat
gtctatgttggtggagcacctgatcaggtcttatcaagtctgaagtcctatgtagctacg
gatgctggatttcgaggttgtctccggagtttccagttccaaagacgcgatttcaatgtt
ctagaggaagatgagacattagggatcagcaatggttgtccagaggaatcacttatgtcc
cgcatggcgtatttcaatgggcagggtttcatctcttccagcgaaaagatcacaccattt
tcaaacttcgaaggaggtttcaattttaggacattacagtccaatgggttgcttttctac
tacagtgaaggacctgatatcttctccctttctctgaacaatggtaccatcattttcaaa
atgaaagaagcaacaatgcaatcaacaaagaaacaatataacgatggatggaatcatttt
attagagcaactgtctccccatcaagttgccaattaatagtggacgacgaggatcaaaca
acagttgattgttccacagaagaatctgtctatcccaaaggaaaattctactttggaggt
tcagtccatgaccaatatgttaacttcacaggctgcatcagcaatgcttacctcagcaga
acagagaaagatattgcagtagaagatttccagacatatgctgaaaaggtacaagcctct
ctgcatggctgcccagctgaaactcatccagccgcaattattcagaaacatcaaaagtat
gttgctaaagccaagagaggtcgaggaagaaaggtgaacagtggtacagcagaattacga
aaagtttcagtggttcacagtggaaagacaaaagaaaatgtcctacatgaagagtcacgc
tgctatctaccaactcatcccaagacaatccaacatgcccaccaatatggcggcattcct
aacagtcgacaggagatttttggaatccctgaatatttcaatcacaaatcccacttctct
gtcagcatcagaactaaatcttcacatggacttatattttatgtggcgaataaagaggaa
gaccagttcatgacgcttttcattgcccgtggtcaccttatttactcattcagtaatggc
cgtgaaaaattgaaattaagaagtttagagaaatacaatgatggtctctggcacaatgtt
attttcacacatgaaaataataaaggacgtttaataatagatggtctccacattctagag
ggtagtctcatcagtcctgtttatccatggaatataactgaaccattttatgtgggtggt
gtgccattgggaaaagctgccaaaaacattcaggtcaagtcaatccaaagttttaatggc
tgtcttcggaacttccagctaaacagacagcggttgttaccagcaagtcaaacatttggt
gttacaccttgctttgaaggtccgactgagtctggaacatatttttccacagaaggagga
tatgtgattttggatgattcattcaatttaggattacaatttgagcttgtttttgaaatt
cgtgcaagaaatcattcaggaatactgttacatattcatagttacaaccggaaatacctg
aatctcttcatggaatatggacaggtaatattaaaagtcagcaatggaactgcagagttc
aaaacatcagtttctccaaagcaaagtctgtgtgatggccggtggcatcgaatagcagtt
atcagagcatcaaatgttgtgcagttggatgtggactctgaggtaaaccacttagtgggg
ccaataacgtcacgctctttcagtcccaaggagccagtatttgttggaggagtgccagag
tcactactcagctcaagactgagcatgcgccagtcattcactggttgcatgagaaacttc
aacatcaatgaaactcctgtcattttcgccaaagctgccctggtcagtggaggagtcagc
atcaactcatgccctgcagtttaa
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