Hemiscyllium ocellatum (epaulette shark): 132832856
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Entry
132832856 CDS
T09720
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc02010
ABC transporters
hoc04145
Phagosome
hoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132832856
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132832856
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132832856
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoc02000
]
132832856
Enzymes [BR:
hoc01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
132832856
Transporters [BR:
hoc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
132832856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_30
RsgA_GTPase
SbcC_Walker_B
Snf7
Motif
Other DBs
NCBI-GeneID:
132832856
NCBI-ProteinID:
XP_060707026
LinkDB
All DBs
Position
35:complement(45861614..45909835)
Genome browser
AA seq
717 aa
AA seq
DB search
MESPGAALSPPAPAGTLPLPRARRLLLAALAPLLQLGLSLLAVPEAVPSLSALALSLSLS
RSLGGLHRPLLLYTACCGLSPALYRLLGLGLSLGLAPRSLAALLLPHAASGLALALLEAA
AALLRARARGSLPGTQRSIRRRLLALSRPDLVPLSGAFTFLTLAVIGEILMPYFAGKVID
LLKSDFDHQAFLIAIFYMFISSMGSSISAGLRGGLFMFTMYRLNKRVRKLLFSSLVQQEI
GFFEITRSGDITSRLSTDTTLMSRSIAANVNIFLRSLVTTVGVLFFMVSLSWQLTLLIFI
DSPLIIVLQKLYSKYHMNLVQEIQDSIAKSNQVAGEIVSAIRTVRSFATENEESELFEEK
LQATNQLKNKRDFVTAVYFLFRRHIQLVMQLIMLYTGQYLIRNGQMSSGDLVAFIFYQGD
FGSYVRTLVHTYSEMTHSVGAAQKVFEYMDRKSSVPTDGKLVKETLKGHVEFQNVSFSYP
TRPDVQALKNVSFELKCGEITALVGPSGGGKTTCVNLLERFYQPQSGQILLDGRPIEEYE
HKYYHNKLGVVGQEPVLFALSVRDNICYGLQNVPMSSVTAAAQKANAHEFIEGLERGYST
DVGETGGQLSGGEKQRIAIARALIRQPQILILDEATSSLDVESEHTIQQALSKDTGQTIL
VIAHRLKTVEKADKIIVIERGMVVEEGKHQELMERKGCYFHLLQRLSPNGEQSVTEF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggagtccccgggagcagcgctctcccccccggccccggccgggaccctgcccctgccc
cgggcccggcgcctgctcctggccgccctggcccctctcctgcagctggggctgtcgctg
ctggcggtgccggaggcggtgccgtccctgtcggccctggccctcagcctgtccctgagc
cggagcctgggcggcctgcaccgcccgctgctgctgtacaccgcctgctgcggcctctcc
ccggctctgtaccgcctcctggggctgggcctcagcctgggcctggcgccccgctccctg
gccgcccttctgctccctcacgccgcctcgggcctggccctcgccctcctggaggcggcg
gcggctctgctccgggcccgggcccgcggctccctcccggggacacagcgcagcatcagg
cgccgcctcctcgccctgtcccggcccgacctggtccctctgagcggggcgttcaccttc
ctcacactggccgtgatcggtgagatcctcatgccttactttgcagggaaggtgattgat
ttactgaagtctgactttgaccaccaagcgttcctcattgccatattctacatgttcatc
agctccatgggaagctccatttcagccggtctccggggaggcctcttcatgttcacaatg
tacagactgaacaaacgggtgcgaaaactgctcttctcatccctggtacagcaggaaatc
ggcttctttgaaataactcggtctggtgatatcacctcacgcctctccactgacactacc
ctcatgagtcgctccattgcagccaatgtgaatatcttcctgcgaagcttggtgacaaca
gttggggtcctcttcttcatggtctccctctcctggcagctcaccttgctgatatttata
gattctcctctcatcatagtccttcagaagctgtatagtaagtatcacatgaacctggtc
caggagatacaggattccatcgccaagtcaaaccaagtggccggagagattgtttctgcg
atcaggacagtccggagttttgccaccgagaacgaggaatccgaattgtttgaggagaag
ctgcaggcaacaaaccaactcaagaataaacgggattttgttacagcggtgtatttcctg
ttccgtaggcacatacaactggtgatgcagctgatcatgttgtacactggacagtacctg
atccggaacgggcagatgagcagtggggatcttgtcgctttcatcttttaccagggggac
ttcggatcttacgtccggaccctggttcacacgtactcggagatgacccactcagtggga
gcagcccagaaagtgtttgagtatatggatcggaagtccagtgttcccacggacgggaag
ctggtaaaggagactctgaaaggacatgtagaattccagaatgtgtccttctcttaccca
accagacctgacgttcaggccctaaagaatgtctcctttgagctgaagtgtggtgagatc
acggccctggtgggaccctccggagggggtaagacgacatgcgtgaacctgctggagagg
ttttatcaacctcagtccggacagatcctgctggatggcagacccattgaggaatatgaa
cataaatattaccacaacaagttgggggtcgtgggacaggagcctgtgctgtttgcactt
tctgtcagggacaatatctgctatggcctccagaatgttccgatgtcatcggtcactgca
gcagctcagaaagccaatgcccatgaattcatcgagggactggagcgtggctacagcaca
gatgtcggagagacgggaggacagctttctggtggagagaaacagagaatagccattgct
cgagctctcatccgacaacctcaaatcctcatcctcgacgaagcaaccagttccctcgat
gtggagagtgagcacacgatccagcaggcattatcgaaggacacgggacaaaccatcctg
gtcattgcccaccgtctgaagactgtggagaaggcagacaagatcattgtgattgagaga
gggatggtggtggaggagggaaagcaccaggaattaatggagagaaaaggctgctatttc
cacctgctccagagactgtctcctaacggggagcagagcgtgactgagttttaa
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