Hemiscyllium ocellatum (epaulette shark): 132832947
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Entry
132832947 CDS
T09720
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like isoform X1
KO
K08525
retinoid X receptor beta
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03320
PPAR signaling pathway
hoc04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
132832947
03320 PPAR signaling pathway
132832947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoc03000
]
132832947
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hoc03310
]
132832947
Transcription factors [BR:
hoc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
132832947
Nuclear receptors [BR:
hoc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
132832947
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
132832947
NCBI-ProteinID:
XP_060707174
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Position
35:complement(30440532..30480046)
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AA seq
425 aa
AA seq
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MSSSPLSVAGSGVPSSVSSPVSSVGSHFPVITSSLSSPSTPALGYRPVNSSQVHSAAGQS
GFPAVSSADDVHPALGTNQATSYPAGSAPATPTLRLRNICAICGDRSSGKHYGVHSCEGC
KGFFKRTVRKDLSYTCRDSKDCTIDKRQRNRCQYCRYQRCLATGMKREAVQEERQRSRER
GEEVEPTSGPNDEMLVEKILEAEVAGEQKLELQADGEGSETVSPNDPVTNICQAADKQLF
TLVEWAKRIPHFSQLPLDDQVILLRAGWNELLIASFSHRSITVRDGILLATGLHVHRNSA
HSAGVGAIFDRVLTELVSKMRDMEMDKTELGCLRAIILFNPDAKGLSNPVGVEMLREKVY
ASLESYCKQKYPEQLGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEA
PHRLS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctctccactctctgtcgctggctcaggagtcccgtcttcggtcagttcaccc
gtcagcagcgttggctcgcacttcccggtcatcacctcgtccctgagctcaccgtcaacc
ccggcgctgggctaccggcccgtgaacagctcgcaggtccactccgcggccggccagtcg
gggttccccgccgtcagcagtgccgacgacgtccacccggcgctgggcaccaaccaggct
acatcctacccagccggctccgcccctgccacccccaccctgcggctgaggaacatctgt
gccatttgtggggacaggtcttcaggcaaacactacggcgtgcacagctgcgagggttgt
aaaggcttcttcaagcgcacggtgaggaaggacctctcctacacctgccgagacagcaag
gactgcacgatcgacaaacggcaacgcaaccgctgccagtactgccgctaccagaggtgt
ctggccaccggcatgaagcgggaagctgtccaggaggagaggcagaggagcagagagagg
ggcgaagaggtggagcccaccagcgggcccaacgacgagatgctggtggagaaaatcctg
gaggccgaggtggcgggggagcagaaactggagctgcaggccgacggggagggaagcgaa
acggtgtcgccgaacgaccccgtgaccaatatctgccaggcggctgacaaacagctcttc
acgttggtggagtgggcaaaacgcatcccacacttctcccagctcccactggatgaccag
gtcatcctgctgagagcaggttggaatgagctcctgatcgcctccttctcgcaccggtca
ataacggtgagggatggcatcctgctggccactgggctccatgttcaccggaacagtgca
cacagcgccggcgttggagccatcttcgacagagtgctgactgagctggtctctaagatg
agagacatggagatggacaagacagagctcggttgcctgcgagcgattatcctctttaac
ccagatgccaaggggctgtcgaacccggtgggggtggaaatgctgcgggagaaggtttac
gcttccctcgagtcttactgtaaacagaaatacccagagcagctcggcaggtttgccaag
ctcctgctccgcctgcctgccctgcgctccatcggactcaagtgcctggagcacctgttc
ttcttcaagctgatcggggacacccccatcgacaccttcctcatggaaatgctggaggca
cctcaccggctctcctga
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