Hemiscyllium ocellatum (epaulette shark): 132833332
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Entry
132833332 CDS
T09720
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hoc03036
]
132833332
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132833332
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
DEAD
HDA2-3
Na_Ca_ex_C
Pyr_excise
Epsilon_antitox
Motif
Other DBs
NCBI-GeneID:
132833332
NCBI-ProteinID:
XP_060707492
LinkDB
All DBs
Position
36:39903662..40024055
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AA seq
1072 aa
AA seq
DB search
MSSFNLDRFRYEKKRGERDLDLDLDRRRGSPRDPGFPEVGGPAVTVVPETPEGKQSNFLS
YFRRKEKGVLFLDSESETEETCKKNLSCQAVNGRPDGCIQKLNDAVDFSSGEDEQLSLKE
NGSFMDSSGSSHSVNLEDSTASKVQKLTEIFPNRTDAELLQIIESTSTLDGAVAAGLILF
GEGATPRKRKLEMSQSSSSEESDDLPISSTKKKKPNCHASQDLGEDFEKKESILRKLHNK
FPDLDKEELREVLEEHDWSFWEALEALQAFTNQDLEDEVPCIPEPKCINGKGAISHFKVQ
PKEIPAMQLKLSGAAEDQDGKSKKHDKGLKDGRSVQKECSDSEDVESILSGGESSLDEDY
SSADEEMEDEYRTKIVSFLQDGTVDELSLIPQCSLRKAEKIIELRPFNNWESLFKKFNRS
HGLSEDLIWNCKIVIKEREVVLKLMNRCAEISQRLEEQVTEITEDGGSHQTIEQPVILSE
SLELKPYQLVGLNWLVLLNKHRVNGILADEMGLGKTVQAISFLAYLYQEGDKGPHLIIVP
ASTLDNWIRELKQWCPDLKVLLYYGSLEDRKVLRSDILHKFVDFSVIVTTYSCSISNADD
RSLFRRLKLHYAVFDEGHMLKNMSSIRYQHLMTFNAEHRLLLTGTPLQNNLLELMSLLNF
VMPNMFSSSTSEIRRMFSSKSKTLEQQSSFEKGRIAHAKKIMKPFILRRVKSEVLQQLPP
KQDRVEICSMSDKQEQAYAALYKKLKKSINSNEKHELCNVMMQLRKMANHPLLHRQYYTV
EKLRKMAKLMKKEPTHRDANPDLIFEDMEAMTDFELHHLCQEYSSIRSFQLEMELLLDSG
KFQILESILTELKEEGSRVVLFSQFTMMLDILEVFLRHHKHRYLRLDGKTQISDSAIKWH
LLNDAQFEFCYCHSAPDLITALVQTWTKEQNARGKWEWQSSTECGIKKLQQNWNRIHLID
QFNTDMDIFVFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQKKVVHV
VKLISKGTIEESMLKIGEHKLKLEQDMTSTETGGEGSIPLNIATLLKTSLGL
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgagctccttcaacctcgaccgtttccgttatgaaaagaaacgcggcgagcgggacctg
gacctggacctggaccggcggcgtggctccccgcgggatcccggcttcccggaggtggga
ggcccggcagtgaccgtcgtaccagagactccagaaggaaaacagtcgaactttttatcg
tattttaggagaaaagaaaagggagtcctttttctcgattctgaatctgaaactgaggaa
acatgcaagaaaaatttatcatgtcaggcagtgaatggaaggccagatggatgcattcaa
aaattaaatgacgctgttgacttttcatctggtgaggatgaacagctttcccttaaagaa
aatgggtcttttatggacagcagtggctcgtctcattctgttaatttggaggattctact
gcttccaaagtacaaaaactgacagaaatatttccaaatagaacagatgctgaactattg
cagataattgaatcgacaagtacactggatggagcagtagctgcaggattaatcttgttt
ggagaaggagctactcctcggaaaaggaaacttgaaatgtcccaaagcagcagctctgaa
gaaagtgatgatctccctatttcctctaccaaaaagaagaaacctaattgtcatgcgtca
caagatttaggagaagattttgagaaaaaagaatctattctgagaaagcttcacaataaa
tttccagatttagacaaagaggagctccgagaagtcctggaagaacatgactggtccttt
tgggaagccttggaagctttgcaggcatttaccaatcaagatttagaagatgaagtgcct
tgtataccagagcctaaatgcataaatggaaaaggtgccatctcacattttaaagtgcaa
ccaaaagagataccagcaatgcaattgaaattatctggagcagctgaagatcaggatggt
aaaagcaaaaaacatgacaaaggattaaaagatggtagaagcgttcaaaaggagtgtagc
gattctgaagatgtggaatccattctttctggtggtgagagctcacttgatgaggactac
agtagtgcagatgaagagatggaagatgaatacaggactaaaatagtcagcttcttgcag
gatggtacagtggatgaactttctcttatacctcaatgttctttgagaaaggctgagaag
attatagaactccggccctttaacaattgggaatcactgtttaagaagtttaatcggtca
catggtttgtctgaagacttgatatggaattgcaaaatagtaatcaaggaacgggaagta
gttcttaaacttatgaaccgatgtgccgaaatctcccaaagattagaagaacaagtgaca
gaaataacagaagatggtggaagtcaccagaccattgaacagcctgtcattctgagcgaa
agcttggaacttaaaccatatcaactagttggactaaattggttggttttgctgaataaa
catcgggtgaatggtatattagcagatgagatgggactggggaaaactgtacaagctata
tcattccttgcctacctttaccaagaaggagataaaggaccacatctcatcattgtacct
gcttctaccctagacaactggatccgggaacttaaacagtggtgtcctgatctcaaagtc
ctgctttattatggatctttagaagaccggaaagtcctcagatctgatatacttcacaag
tttgtggatttcagtgtaattgtgactacgtatagctgctcaataagtaatgcagatgac
cgcagtctctttcgacgtttaaagctccattatgcagtttttgatgaaggacacatgctg
aaaaatatgagttccattcgatatcagcatcttatgacatttaacgctgaacatcgcttg
ctgttgactgggactccactgcagaataatctcctagaattgatgtctctgttgaatttt
gtcatgccaaatatgttcagcagcagtactagtgagattcgcaggatgttttcctcgaaa
agtaaaaccttggaacagcaaagtagttttgaaaaagggagaattgctcatgccaagaag
atcatgaagccatttattctgaggagagtaaagagtgaggtcttacaacagcttccaccc
aagcaagaccgtgtagaaatatgttcaatgtctgataaacaagaacaagcatatgctgct
ctctacaagaagttgaagaaatcaatcaacagtaatgaaaagcacgagttatgtaatgtg
atgatgcaacttcgaaagatggctaaccacccactacttcataggcaatattacactgtg
gaaaagttgaggaaaatggccaaactgatgaaaaaggagcccactcacagagatgccaac
cctgacctcatctttgaagacatggaggcgatgacggattttgaattgcaccatttgtgt
caagaatacagtagcataagaagctttcagttagaaatggagctgcttttggattctggg
aagttccaaattctagagagtatacttacagaacttaaagaggagggttccagagttgtg
ctctttagtcagtttactatgatgttggacattctggaagtattcttgagacaccataaa
caccgatatcttcgattggatggcaaaactcaaatctctgatagtgctattaagtggcac
ctgctcaatgatgcccagtttgaattctgctactgccactcagctcctgacctcatcaca
gccttggttcagacatggacgaaagagcaaaatgccagagggaagtgggaatggcagtcc
tcgactgagtgtggtatcaagaagctccagcagaactggaatcgaatccacttgattgat
cagtttaatacagatatggatatttttgttttcctgttatcaactaaagctggaggattg
ggtataaacctaacctcagccaacattgtcatccttcatgatatcgactgcaatccctac
aatgataagcaagcagaagatcgatgtcacagagtaggacagaaaaaggtagtgcatgtt
gtaaaactgatcagcaaagggactattgaagaatccatgcttaaaattggtgaacataaa
ttgaaactagaacaggatatgacttcaacagaaacaggaggcgaggggagcattccactt
aatatagcaactttattgaagacttcattgggattatag
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