Hemiscyllium ocellatum (epaulette shark): 132833360
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Entry
132833360 CDS
T09720
Symbol
pkd2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hoc03037
]
132833360 (pkd2)
04040 Ion channels [BR:
hoc04040
]
132833360 (pkd2)
Cilium and associated proteins [BR:
hoc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
132833360 (pkd2)
Ion channels [BR:
hoc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132833360 (pkd2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
132833360
NCBI-ProteinID:
XP_060707555
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All DBs
Position
36:complement(44890570..44923430)
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AA seq
885 aa
AA seq
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MSSRVRPQPPLAAPAGGGGRFTPAAGSRTQGTEQLEMRRIRAPDSASSRQAWSRENPGYE
PGDEELDWAGISASSGTGGSDSRGEAGPGPGPGPGPEDQQQQQLRAALPRSLLQKARALW
GTRLTVDHPVSRERYLKRMLRELVTYSIFLVILCVLTYGMVSSNMYYYTKVMASLFLDTP
FSKNENTNFRSVSNMDDFWKFAEGPLLDGLYWDMWYNNETLAENRSFIYYENLLLGVPRI
RQLKVKNESCKIHEDLKDEIKECYDVYSVANEDTSPFGLMDKTAWIYTSEEDLKETRYWG
LIATYSGAGYYLDLARNRDETMTKLKLLKENLWLDRGTRVVFITFSVYNANINLFCVIRL
VVEFPATGGALSSWQFQTVKLIRYVSSFDYFLAACELAFCIFIFYYIIEEILEIYIHKLC
YFKSVWNCLDVVIIVLSLIAICINIYRTSIVNELLGESLENQNSYPNLESLAYWQIQFNN
MAAMVIFFVWIKIFKFISINKTMTQLSSTMSRCAKDIIGFAIMFFIVFLAYAQLAYLVFG
PQVDDFNTFHTCIFTQFRIILGDFDFAKIEEADRILGPVYFVTFVFFVFFILLNVFLAII
NDTYSEVKSDMAQQKNEMELTDLIKKGCSKAMVKLRLRKTTVDDITETLRQAGGKLNFDE
LRQDLKGKGHTDAEIEAIFAKYDQDGDQELTEHERQQMRDDLEKERDDLDLDRSSLPRSA
SGRSFPRSMDDSEEEDEDDSGHSSRRRGSSSSGVSYEEFQVLVRRVDRMEHSIGSIVSKI
DAVIVKLEAMERAKLKRRDVLGRLLDGVTEDERLGRDNDVHREQMERLVREELERWESDE
TVSQLSQHLGTPLGINGRSRSRSSRPSSSQSTDGLEAGGVGASHV
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgggtgcggcctcagccgccgctagcagcaccggcggggggaggaggccgg
ttcaccccggctgccgggtcccgcacccagggaaccgaacagctggagatgcggcggatc
cgagctccggactcggcctcctcccgccaggcttggagccgggagaacccgggatacgag
cccggtgatgaggagctggactgggccgggatcagcgccagcagcgggacgggaggctcg
gatagccggggagaggccggccccggccccggccccggccctggtcctgaggaccagcag
cagcagcagctccgggcagccctaccccggagcctcctgcagaaagcccgagctttatgg
ggaacacgactgactgtggatcaccctgtgagcagagaaagatacctgaagagaatgctg
cgagagttggtgacctatagtattttcctggtgattttgtgtgtcttgacctatggaatg
gtcagctccaatatgtactactataccaaagtcatggccagtctcttcctagatactccc
ttttccaaaaacgaaaacaccaacttcagaagtgtgtccaacatggatgatttctggaag
tttgcagaaggccctttgttagatggactttattgggatatgtggtataataatgaaaca
ctggctgagaacagaagcttcatttactatgaaaatctgcttttgggagtgcctcgcata
aggcagctgaaagtgaagaatgaatcatgtaaaatacatgaagatctgaaagatgaaatc
aaggaatgctatgatgtctattcagttgcaaatgaagatacatcaccatttggcctgatg
gataaaacagcctggatttatacaagtgaagaagatttgaaagagacccgttactggggg
ttaattgcgacctacagtggagctggatattacctggacctggcaaggaatagagatgag
acaatgaccaagttaaaactgctgaaagagaacctctggcttgatcgaggcaccagggtt
gtgtttattactttctccgtctacaatgctaacattaacttgttttgtgtgatcaggttg
gtggttgaatttccagcaacaggcggggctctttcatcatggcagtttcagacagtgaaa
ctcattcgctatgtatcctcatttgactatttcctggcagcttgtgaacttgccttctgt
attttcatattttactacataattgaggagattctggagatctatattcacaagttatgt
tacttcaagagtgtttggaactgtttggatgttgtgattattgtgttatccttgatagca
atttgcatcaatatctatcgcacatcaatagtgaatgagcttttgggcgagtcactggag
aaccagaattcataccccaatcttgaatctctagcttattggcagattcagtttaacaac
atggcagcaatggttatattttttgtatggattaagatcttcaaatttattagtatcaat
aagaccatgacacagttgtcttctaccatgtctcgctgtgccaaagacattataggattt
gccatcatgttttttattgttttcttggcttacgctcagttggcatacctagtctttggc
cctcaggttgatgacttcaacactttccacacttgcatttttactcaatttcgcatcatt
ttgggagattttgattttgccaaaattgaagaagctgaccggattctgggaccagtttat
tttgtcacttttgtgttcttcgttttctttattctcttgaacgtgtttttggccattatt
aacgacacctactctgaagtgaaatctgacatggctcagcagaaaaatgagatggaactc
actgaccttatcaagaagggatgcagcaaggctatggtgaagctccggctgaggaagact
acagtagatgacattactgagactctgcgtcaagctggaggaaaactaaactttgatgag
ttacgtcaggatctgaaggggaagggtcatactgatgcagagatagaagcaatctttgcc
aaatatgatcaggatggtgatcaggagctgacagaacatgaacgtcaacagatgagggac
gacttggagaaggagagggatgatttggacttggataggagctcactgcctcggtcagcg
agtggccggagcttcccgcggagtatggatgattctgaggaagaagatgaagacgatagt
gggcatagctcaaggaggagaggcagcagctccagtggggtatcatatgaagagtttcaa
gtgctggtgaggcgtgtggatcgaatggagcattccattggaagcattgtgtcaaaaatc
gacgcagtgattgtgaagctggaggccatggagagagccaagctgaaaaggcgagatgtg
ctgggcagattgctcgatggtgtgacagaggatgagcgactgggtcgtgacaatgacgtt
caccgagagcaaatggagcgtctggtgagggaggagttggaacgctgggagtctgatgag
accgtgtcgcagctgagtcagcatctgggaacacctctgggaataaatgggagatcccgc
tcccgcagttctcgcccatcctcctctcagtctactgatggcctggaagctgggggggta
ggggccagccatgtttag
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