Hemiscyllium ocellatum (epaulette shark): 132833401
Help
Entry
132833401 CDS
T09720
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03020
RNA polymerase
hoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132833401 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
132833401 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132833401 (polr2b)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132833401 (polr2b)
Enzymes [BR:
hoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132833401 (polr2b)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
132833401 (polr2b)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
132833401 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
132833401
NCBI-ProteinID:
XP_060707622
LinkDB
All DBs
Position
36:29678166..29726655
Genome browser
AA seq
1176 aa
AA seq
DB search
MYDPDDGEDTQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRI
VEDAPPIDLQAEAQHTSGEVEEPPRFLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNL
TYSAPLYVDITKTVIKEGEEQMQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECP
LDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVS
MLARGGQGVRKSAIGQRIVATLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMM
EMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEILQKEVLPHVGVSDFCE
TKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIY
SQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST
LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMAYISVGSQP
SPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPDQLMTTLRKLRRQMDIIV
SEVSMVRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVA
SGVVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINS
IVAIASYTGYNQEDSVIMNRSAVDRGYFRSVFYRSYKEQESKKGFDQEEVFERPSRETCQ
GMRHAIYEKLDEDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRT
SETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC
EGITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDY
GYHLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGR
SRDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYQVHVCNLCGLMAIANTRTHTYECR
GCRNKTQISLVRMPYACKLLFQELMSMSIAPRMLIS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatccggacgacggcgaggatacgcaatatgatgaagatgatgatgaaatcact
ccagatttgtggcaggaggcttgttggattgttatcagttcatactttgatgagaaaggt
ttggttcgacaacagttggattcatttgatgaattcatacaaatgtcagtgcagagaatt
gtggaagatgctcctccaatagatctccaagctgaagcacagcatacttctggggaagta
gaagagccgcccaggttcttactaaaatttgaacaaatctatttatccaaacccacacat
tgggaaagggatggggcaccatctccaatgatgccaaatgaagctagattacgaaatctt
acatattcagcccctctctatgtggacatcacaaagacagtgattaaggagggagaagag
cagatgcaaacccaacatcagaaaacgtttataggaaagattcctatcatgcttcgatcc
acatattgtcttcttagtggtctgacagatcgtgatctctgtgagctcaatgaatgccca
ctggatcctggtggatatttcatcatcaatggatcagaaaaggtcctaattgcacaggag
aaaatggcaacaaacacagtatatgtgtttgcaaagaaggactccaaatatgcgtacaca
ggggagtgtcggtcctgtttagagaattcttctcgtcccacaagtaccatctgggtcagc
atgctagcaagaggaggacagggtgtaagaaaaagtgcaataggccagagaattgttgct
acactaccatacatcaggcaggaagttcctataattattgtgtttcgtgctttgggattt
gtgtctgatcgagacattttggagcacattatctatgattttgatgatcctgaaatgatg
gaaatggtgaagccttcactggatgaagctttcgttatccaggaacaaaatgttgcattg
aattttattggttcaagaggtgcaaaacctggtgtaacaaaagagaagagaattaagtat
gcaaaggaaatcctgcagaaggaggtgctgccacatgttggagtcagtgacttctgtgag
actaagaaagcttatttcttgggttacatggttcatcgattactattggctgctttaggc
cgaagagaattggatgacagagatcattatgggaacaaaaggctagacctggctggacca
ttgcttgctttcctgtttagaggtatgtttaagaacttgttgaaagaagtacggatatat
tcccaaaagttcatagaccgagggaaagatttcaacttggagttggcaattaaaacacgg
attatttcggatggtctaaaatactcattagcaacaggaaattggggtgatcaaaagaag
gctcatcaagccagagctggtgtatcccaggtattgaatcggttgacctttgcttcaact
ctctctcaccttcgtcgtctaaactctccaattggaagagatggaaagctggcaaaaccc
aggcagctgcacaataccttatggggtatgatatgccctgctgagactccagagggccat
gctgtggggctagtgaaaaatctagctttgatggcgtacatttctgtaggatctcagccc
tcgcccattttggaattcttggaagagtggagcatggaaaatcttgaagaaatttctcct
gctgctattgcagatgctacaaaaatttttgtgaacggttgttgggttggaatacataaa
gatcctgaccagctgatgaccacgttaagaaagctgaggcgtcagatggatatcattgtg
tctgaggtatccatggtgagggacatacgcgagcgtgaaattcggatttatacagatgca
ggtagaatttgtcggcctcttttgattgtagagaaacagaagttgcttctgaagaagagg
catattgatcaattgaaagaacgagagtacaacaattacagttggcaggatcttgtggct
agtggtgtggtggagtacattgacacgttggaagaagagacggtaatgttagctatgact
cctgatgacttgcaggaaaagggtgttgcatactgttcaacatatacacattgtgagatt
catccatcaatgattctgggtgtttgtgcatcaattattccatttcccgatcataatcag
tctcccagaaatacgtatcaatcagctatgggtaaacaagctatgggagtttatattaca
aactttcatgtgcgtatggacaccctagcacatgtgctgtattatcctcaaaagccactt
gttacaacccgttccatggagtacctgcgattcagggaactaccagctggtattaactct
attgtagcaattgcttcatatactggttacaatcaagaagattctgtcatcatgaatcgt
tctgcagtagacaggggctatttcaggtctgtattctaccgctcatacaaagaacaagaa
tcaaagaaaggttttgaccaggaggaagtatttgaaaggccttctcgagaaacttgccag
ggtatgagacatgcaatttatgagaagctagatgaagatggactaatagcacctggtgtc
cgtgtgtcaggagatgacgtaatcattggtaaaacagtgacgttgccagaaaatgaagat
gagcttgagagcacaaatcgacgatacacaaagagagactgcagcaccttcctgcggact
agtgagactggtattgtggatcaggtcatggttacactaaaccaagaaggatacaaattt
tgcaaaattagggtgcgatctgtccgaattccacaaattggagacaaatttgctagtcgt
catggtcagaagggaacgtgtggtatccagtacagacaagaggatatgccattcacgtgc
gaaggtatcaccccagacattataatcaatccacatgccattccttctcgaatgactgtt
ggtcacttgattgagtgcctacaagggaaggtgtcggcaaataagggtgaaattggtgat
gctacaccatttaatgatgcagttaacgtacagaagatttcaaacctgttatcagactat
ggatatcaccttcgaggaaatgaggttctatataatgggtttacagggcgtaaacttaca
tcacagatctttattgggcctacttattaccagcgtctgaaacatatggtagatgacaaa
attcattctcgtgctcgaggacctgttcagatcctgaacagacagcctatggagggtaga
tctcgtgatggtggtctacgttttggggagatggagcgagactgtcagattgctcatggt
gcagcccagtttttgagagagaggctttttgaggtttctgatccttatcaggtgcacgta
tgcaatctttgtggactaatggcaattgccaataccaggacacacacttatgaatgccga
ggatgtcgtaacaaaactcagatttcgttggtacggatgccctacgcctgcaaacttctt
ttccaggagttgatgtcaatgagtatcgcaccacgaatgttgatttcttaa
DBGET
integrated database retrieval system
