Hemiscyllium ocellatum (epaulette shark): 132833491
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Entry
132833491 CDS
T09720
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132833491 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132833491 (exosc10)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
132833491 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
132833491
NCBI-ProteinID:
XP_060707783
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Position
37:complement(13091861..13154199)
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AA seq
883 aa
AA seq
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MAARGRSAEDADSDPGERPLSGDGPIPGFSDADSFVKHVLGTVVSTTKASNGLPQPGDEF
DFYRSFPGFQSFCDTQADRLLSCMSQLMQYHGCRSHVRVRNKVTELEDKFDLLVDANDVI
LEQVGILLDEASGVNKNQQPVLPAGLQPPKTIISSWNRKNTEMKKSKSETFRLFHAKNIP
RPQVKFKEKVDNSNTPFVPKLFIKPNALKPLPAVLLNRRSRMERPEDLDVPAALADFIHQ
QRMQHNEQDMLAHPYQYELNHFEPSESVLAKTEPQMYKPLSETNFQLITTFDELVELNEK
LSKCKEFAVDLEHHSYRSFLGLTCLIQLSTREEDFVIDTLELRSEMYILNEVFSDPSIVK
VFHGADSDIEWLQRDFGLYVVNMFDTHQAARVLNLGRHSLDYLLKQYCNVQTDKRYQLAD
WRLRPLPAEMLQYAQEDTHYLLYIYDKMKNQLWEQGNEQANLVQLVWHKSRDICLKKYCK
PIFTEESYLELYRKQKKQLNTQQLTAFRLFYAWRDSTSRREDESTGYVLPNHMMIKIAEE
LPKEPQGIIACCNPIPPLVRHHINELHLLVQQARDMPLLKTESAQLQQKKRTLLKADKTE
NLLFGPHDSSHLSGNVQFVHGSVPLIQTSKLFPDLEDGDTSLTLTSAKAIITIFDDSLAN
EKNHETLTTAQQKARTILESFENPFRMYLPSKDSNIYISQAAKFDPSTKIYEVSNRWKLL
SQEHLQKEATKRQEQTKEAKSTPKPEVVRQQIKQDYIAEVQEIPSVRQQAAMAAEQQSVK
RERTKSGTGTEAVPPEKKKSKSGTEEPKNPKNIKPFDYSKSDFKVFAAGNKSKESTQFDP
NYEADVPHSKKTGKKNRQSAGNRSMTFTNSKSDRGFKHSWPKR
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggggagatcggcggaggatgcggattcggatccgggagagaggcctctc
agcggtgacggccccatcccgggtttcagtgacgcggatagctttgtgaagcatgttttg
ggaacagtggtttcaactaccaaagcctccaatgggcttcctcaacctggtgatgagttt
gacttttaccggagtttccctggatttcaatctttctgtgacacgcaagctgatcgactc
ctgagctgcatgagtcagcttatgcagtatcatggctgtcgaagccacgtcagagtccgt
aacaaagtgacagaactggaggacaaatttgacttgttggtggatgcaaatgatgttatt
cttgaacaagttggtattttactggatgaagcttcaggtgtgaacaagaatcagcaacca
gttctcccagcaggacttcaacctccaaagaccatcatctccagttggaaccgcaagaat
actgaaatgaagaaatcaaagtctgaaacgttccgtctgtttcatgcaaaaaacattcca
cgacctcaggtgaagttcaaagagaaggtcgacaattccaacactccttttgtgccaaag
ctcttcatcaaacccaatgccttgaagccactccctgcagtacttttaaacagacgaagt
cgaatggaacgcccagaggatcttgatgttccagcagcattggctgactttattcatcag
cagagaatgcagcataatgagcaggacatgcttgcacatccataccagtatgagctgaat
cattttgaaccatctgagtctgtacttgctaaaacagaaccacagatgtacaaacctctg
tctgagaccaactttcagttaatcacaactttcgatgaattagtggaactgaatgaaaaa
ctctcaaaatgtaaagaatttgcagtggatttggagcaccattcatatcgaagtttcctg
ggattaacttgtttaattcagctatcaaccagggaagaggatttcgttatcgacacactt
gagctgcgcagtgaaatgtatattctcaatgaagtcttctctgatccctccattgtcaag
gttttccatggtgccgattcagatatagaatggttgcagagagatttcgggctatacgtt
gtcaacatgtttgatacacaccaagctgccagagttctcaacctagggcggcattcactg
gattaccttttgaaacagtattgtaatgtacagactgataaacgataccaactagctgac
tggaggctacgaccgttgcctgctgagatgttgcaatatgcccaagaagacactcactat
ttgttgtatatttatgacaagatgaagaatcagttatgggagcagggaaatgaacaggca
aatctcgttcaactggtgtggcataagagcagggatatctgtcttaagaaatactgcaag
ccaattttcacagaagaatcctacctggagctgtatagaaagcagaaaaagcaactgaac
acacagcaacttacagcgttccgattattttatgcctggcgggacagtacttcacggcgt
gaggatgaaagcacgggatatgtgctacccaatcacatgatgatcaaaatagcagaggag
ctgccgaaagagcctcaggggatcatagcttgctgcaaccccattcctccattggttcgc
catcacatcaatgaactgcacctcctggtccagcaggcacgtgatatgcctcttctcaag
acagaatcagcacaactgcaacagaagaaaagaactttgctaaaggcagataaaactgag
aaccttctgtttggacctcatgacagttcccacttgtcgggcaacgtgcagtttgttcat
ggctcagtgccactgatacaaaccagtaaactgttccctgatttggaggatggcgatacg
agcttaacactcacctctgccaaagcaatcataaccatatttgacgattctcttgcaaat
gagaagaaccatgaaacattgacaacagcacaacagaaagcgagaactattttagaatca
tttgaaaatcctttcagaatgtatctgccttccaaggacagtaatatatacatctcacaa
gcagcaaagtttgacccttccaccaagatctatgaagtcagcaacaggtggaagttgctg
agccaggagcacctacagaaagaggccaccaaaaggcaagaacaaaccaaggaagcaaag
agcacaccaaagcctgaagttgtgcgacaacagataaaacaggattatattgctgaagta
caagagattccttcagtcagacagcaggctgctatggctgcagaacagcaatcggtgaag
agggagcgaacaaagagtggaacaggaacagaggcagtacctccagaaaagaagaagtca
aaatcgggaacagaggagccaaaaaatcccaaaaacatcaaaccgttcgattacagcaag
tctgatttcaaagtttttgcagctggcaacaagtctaaggaatccacacagtttgatccc
aattatgaagcagatgtgcctcattctaagaaaaccggaaagaagaatcgtcaatctgca
ggaaacagaagcatgactttcactaatagcaaatccgacagaggcttcaagcacagttgg
ccaaagagatag
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