Hemiscyllium ocellatum (epaulette shark): 132833725
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Entry
132833725 CDS
T09720
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoc03000
]
132833725 (ybx1)
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132833725 (ybx1)
03041 Spliceosome [BR:
hoc03041
]
132833725 (ybx1)
Transcription factors [BR:
hoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
132833725 (ybx1)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
132833725 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
132833725 (ybx1)
Spliceosome [BR:
hoc03041
]
Common components
Common spliceosomal components
General mRNP proteins
132833725 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
132833725
NCBI-ProteinID:
XP_060708223
LinkDB
All DBs
Position
37:complement(45467253..45491194)
Genome browser
AA seq
359 aa
AA seq
DB search
MFFQQRESERSGAERRARSESAGSPPAESGPTVPPSRRQPDNTMSEAETEQQPEQQPQQQ
PPPQQQQQQPDKPKSPGEKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKK
NNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSRYAADRNRYRRYNPRRR
GPPRNYQQNIEGGEKGDGAETATDGENQEYQNQQHRPPYRRQRYPPYFVRRRYGRRPQYS
NQPQGEITEGGEINENQAAGEEGGKPNRGQNRFRGYRPRYRRGPPRPRPPREGSSEEDKE
NQGDGQQDQQSHPRRFRRNYNYRRRRPQNPKPKDGEETKAPETPAENISAPETEQGNAE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgttctttcagcagcgggagagcgagaggagcggagcggagcggagagcgaggagcgag
agcgcagggagccccccagccgagagcggcccgactgtaccaccatcccgcaggcagcct
gacaacaccatgagcgaggccgagacagagcagcaacccgaacagcaaccgcagcagcag
ccgccgcctcagcagcagcagcagcagccggacaaacccaaatcccccggggagaagaaa
gtcatcgcaacaaaggttcttggaacagtaaagtggttcaacgtacgaaatggctatgga
tttatcaacaggaatgatacaaaggaagatgtgtttgtacatcagactgccataaagaag
aataacccacggaaatatctacgtagcgttggggacggtgaaactgtggagtttgacgtg
gtggaaggtgaaaagggtgcagaggcggcaaatgtcactggtccaggtggagttcctgtc
caaggaagccgatatgctgcggaccgaaatcgttaccgtcgctacaaccctcgtcgtcga
gggccaccacgtaattaccaacagaacattgaaggtggagagaaaggagatggagcagag
acagcaacagatggagaaaatcaggaatatcaaaatcaacagcatcgtcctccatacaga
agacaacgttatccaccttactttgtccgtcgccgctatggtcgccgtccacaatatagc
aaccagcctcagggagaaattactgagggtggtgaaataaacgaaaaccaagctgctggg
gaagaaggtggtaaacccaacagaggacaaaatcgttttaggggctaccgtccacgctac
cgcagaggaccccctcgcccacgtccaccaagggagggtagtagtgaagaagataaggaa
aatcaaggggatggccaacaagaccagcagtcacatcccagacgatttcgccgcaactac
aactacaggcgtcgtcgaccacaaaaccctaaaccaaaagatggcgaggagaccaaggca
cccgaaacaccagctgagaacatctctgctccagagaccgagcagggcaatgctgagtaa
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