Hemiscyllium ocellatum (epaulette shark): 132833808
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Entry
132833808 CDS
T09720
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132833808 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hoc04812
]
132833808 (spast)
Enzymes [BR:
hoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
132833808 (spast)
Membrane trafficking [BR:
hoc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
132833808 (spast)
Cytoskeleton proteins [BR:
hoc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
132833808 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
AAA_5
TIP49
MIT
Vps4_C
AAA_16
Mg_chelatase
AAA_14
AAA_2
DUF815
AAA_24
IstB_IS21
NPHP3_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
132833808
NCBI-ProteinID:
XP_060708387
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All DBs
Position
3:103368086..103451291
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AA seq
592 aa
AA seq
DB search
MNTPGGRGRKKKGPVRVPPDGTSDRLSLHKRNLYYFAYPLIAVFSFLRFLAFHLWLFFAY
VCQRLAAMASRKAAPSITTAEPEQIRQSHKLAFDYISTALKIDEDDKGQKEKAVEWYKKG
IAELEHGIAIQISGSGKAGEQIERARRLQSKMTTNLIMAKDRLELLEQMLACARFSKPER
EVCRDNSGPPCPSARIQSESGAVPKKKDPLTHTSNSLPRSKYTAKITSPGQRGHQRAQSH
SGISNGTGSSRMPAQPSTSTAKATSTKSTIRPNKPTTPSATPRKKMDLKNFRNVDSKLAN
VILNEVVDSAPSVRFEDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGN
GKTMLAKAVASESNATFFNISAASLTSKYVGEGEKLVRALFSAARELQPSIIFIDEIDSL
LCERREGEHDASRRLKTEFLIEFDGVQSSGDDRVLVMGATNRPQELDEAVLRRFTKRVFV
SLPNEKTRLLLITNLLAKHGNPLSRKDLEHLAKQTEGYSGSDLTALAKDAALGPIRELKP
EEVRNMAASEVRKIRLSDFEDSRRKIKRSVGPQTLEGYKRWNEEYGDTAVNS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaatactccgggtggccgaggcagaaagaagaagggaccggtgcgagtaccgcccgac
ggcaccagcgacagactctcgcttcacaagcgaaacctttactactttgcgtaccctctg
attgctgtgttcagcttcctgcgcttcctggccttccacctttggctgttcttcgcctac
gtctgccagcgtctggccgcgatggcatcgcgcaaggcagccccgtccatcaccacggcg
gaacccgagcaaatccgccagtcccacaaactggcgttcgactacatctccaccgctctc
aaaatagacgaggacgacaaaggacagaaggaaaaagctgtagaatggtataagaagggg
attgcagaactggagcatgggattgcaatccagatttctggatcaggtaaggcaggtgag
cagattgaacgagccaggcgcctacagagcaaaatgacaaccaacttgattatggccaag
gatcgtctggaattgctggagcagatgctagcatgcgcgaggttttccaagcccgagagg
gaggtgtgtagagacaactcgggcccgccgtgccctagtgcacggatccagtcagaaagt
ggagctgtcccaaagaaaaaggatcctttgacccacacaagtaattccctaccccgctcc
aagtacacagcaaaaatcacttccccagggcaacgtggtcaccagagggcccagagccat
agtggaatctccaacggtactggaagttcacgaatgccagcccaacccagtacctctact
gctaaggctacaagtacaaaaagtaccatcagaccaaacaaaccgaccactcctagtgca
actcctcgaaagaagatggatttgaaaaattttcgaaatgtcgatagcaagctggcaaat
gtaattctgaatgaagttgtggacagtgcaccatctgtccgttttgaagatattgctggg
caagagctggcaaaacaagcattgcaagagattgtcattcttccatctcttaggcctgag
ttattcactggacttagagctcctgctcggggattgttactatttggcccaccagggaat
gggaagacaatgctggccaaagctgtcgcctccgaatccaatgcaacattcttcaatatc
agtgctgcaagtctaacctccaaatatgttggagagggagaaaagttggtgagagctctc
ttttcagcagcacgagagcttcagccatccatcattttcattgatgaaatagatagcctt
ctttgtgagagacgagaaggagagcatgatgcaagcagacgcttaaaaacagagttttta
atagaatttgatggggtgcagtccagtggggatgacagagttttagtaatgggggcaaca
aatagaccgcaggagctagatgaggctgtccttcgacgttttacaaagagggtgttcgtc
tcactaccaaatgagaaaacacggctgttgctgattacaaatcttttggccaaacatggg
aatccactaagtcgaaaggaccttgaacatctggccaagcagacagaaggatattcaggg
agtgacttgactgcattagcgaaggatgcagcactgggtccaattcgagagctaaagcca
gaagaagtgagaaatatggctgctagtgaggtgagaaagatcagactgtcagactttgaa
gattcacgtaggaagatcaagcgcagtgtcggccctcagactctagaggggtacaaacgc
tggaatgaggaatacggagacactgctgttaattcatga
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