Entry
Symbol
plod1a
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1
KO
Organism
hoc Hemiscyllium ocellatum (epaulette shark)
Pathway
Brite
KEGG Orthology (KO) [BR:hoc00001 ]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
132833818 (plod1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:hoc04147 ]
132833818 (plod1a)
Enzymes [BR:hoc01000 ]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
132833818 (plod1a)
Exosome [BR:hoc04147 ]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132833818 (plod1a)
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
37:25655355..25687382
Genome browser
AA seq
786 aa AA seq DB search
MEAAMNRIRRVCLVFLILPVLILISQFLVCKSETQENPVPKENLLVFTVATKETDGFKRF
MRSANFFNYTVKVLGLGEEWTGGDVTKSSGGGQKVRILKQALKSYATEKELIILFVDSYD
VIFASGPDELLKKFHQAKHNVVFAAEGFIWPNHHLEVQYPHVREGKRFLNSGGFIGFAPN
IYELVEPWDLQDKHDDQLFYTKTYLDPKKRASLNITLDHKCRIFQNLNGALDEVVLKFED
KRVRARNMEYNSLPVIIHGNGPTKLQLNYMGNYIPKVWTFETGCTECDKDTISLAEKTDS
ELPTVFIGIFIEQPTPFVENFFERFMNLNYPKKQLRIFIHNTQTHHEQHVWQFVEQHGDT
YQTVKVVGPDEEIANADARNMGIDLCRQDVTCDYYFSVDIEVVLQNRDILKLLIEQNRPI
LAPLVSRHKKLWSNFWGALDVDGYYARSEDYVDIVQQRRVGLWNVPYISSVYLIHGTLLQ
SVLTEKDLYHAGSLDTDMAFCHNIREQGIFMYITNRHEFGRILSVANYHTDHLHNDLWQI
SENPQDWEDKYIHENYSSIIENKILLQPCPDVYWFPIFTEKACDDIVEEMEHYGKWSTGD
NKDKRIQGGYENVPTIDIHMNQIGYEKEWQRFLREYIAPLTEEVYPGYYTKAFSFLNFVV
RYKPEEQPSLEPHHDASTFTINVALNRAGVDYEALFDLAFVVRYKPDEQPSLMPHHDAST
FTVNIALNKVGADYQGGGCRFIRYNCSIQAPRKGWALMHPGRLTHYHEGLPTTSGTRYIA
VSFVDP
NT seq
2361 nt NT seq +upstream nt +downstream nt
atggaggctgcaatgaatcgtattcgaagagtttgcttagtgtttctgatcctaccggtc
ctgattttaatctcccaatttctcgtttgtaaaagcgaaactcaggaaaatccggttccg
aaagaaaatctcttggtattcactgtcgccacaaaagaaacagatggcttcaagcgattc
atgagatctgcaaatttcttcaattacacggttaaggtgttgggtctgggtgaggagtgg
acaggtggagatgtgacaaaatcctcaggaggcgggcagaaagtacggattctgaagcaa
gccttgaaatcatatgccacagagaaagaactgatcattctgtttgtggacagctatgat
gtaatatttgcttcagggcctgacgaattactgaagaagtttcatcaggcaaagcataat
gtggtctttgctgctgagggctttatttggcccaatcaccatcttgaagtccagtaccct
catgtaagggaaggcaagcgattcctcaattccggaggatttattggctttgctccaaat
atttatgaacttgtggaaccctgggatctgcaggacaaacatgatgatcaactcttttac
acaaaaacatacctggatccaaagaagagggcaagtttgaacattactttggaccacaaa
tgtcggatattccagaatttgaacggagcacttgatgaagtggttctgaagtttgaagat
aaacgagtaagagcacgaaacatggagtataattcattgcctgtcatcatccatggaaat
ggtcccacaaagttgcagcttaattatatggggaactacattccaaaggtctggaccttt
gaaactggctgcacagaatgtgataaagacacaataagtttggcagaaaagacggacagt
gaattacctacagtgttcattggaatcttcattgagcagccaacaccatttgtcgagaac
ttctttgagcgtttcatgaatttgaattatccaaagaagcaactccgaatattcatccac
aacacacaaacccatcatgagcagcatgtgtggcagtttgtagagcaacatggggacacg
taccagactgtgaaagtagttggacctgatgaggagattgccaatgcagatgctcgcaac
atggggattgacctgtgccgacaagatgtgacatgtgactattacttcagtgttgacatt
gaagttgtgctgcagaatcgtgacatcctgaaactcctcattgaacagaacagaccaata
ctggcaccactggtcagtcgccacaagaagctgtggtctaacttctggggggcacttgat
gttgatggatattacgcccgatcagaggattatgtggatattgttcagcaacgcagagtt
ggtctctggaatgttccatacatctccagtgtatacctgatccacggcactttgcttcaa
tcagtcctgactgagaaagatctctaccatgctggcagcctggatacagacatggctttc
tgtcataatatcagggaacagggaattttcatgtacatcaccaacaggcatgaatttgga
cgcattctctccgtggcaaattatcatactgatcacctacataatgacctttggcagatc
tctgaaaacccacaggattgggaagacaagtacattcatgaaaactatagctcaataatc
gaaaacaagatccttctacagccttgtccagatgtatactggttccctattttcactgaa
aaagcctgtgatgatattgttgaggagatggaacattatggaaagtggtcaactggagac
aataaggataaacgtattcagggtggatatgaaaatgtgccaacaattgatattcacatg
aatcagatcggatatgagaaagaatggcagaggtttttaagagaatacattgcaccttta
acagaggaggtctacccaggctactacaccaaggcgttctcgtttctgaactttgtagtg
agatacaaacctgaggagcagccctcgcttgaaccccaccatgatgcctcaaccttcact
attaacgtagctctaaacagggcaggagttgattatgaggctctctttgacctggccttt
gtagttagatataaacctgatgaacagccatctttaatgccacatcacgatgcttctact
tttactgtaaacattgcactcaacaaggttggagctgactatcagggaggtggctgcagg
ttcatcagatataattgttccatccaggctcctcggaagggctgggccctcatgcaccca
gggcgactaacccattaccacgagggtcttccaaccaccagtggcacaagatacatcgct
gtctcttttgttgacccttaa