Hemiscyllium ocellatum (epaulette shark): 132834369
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Entry
132834369 CDS
T09720
Symbol
spg11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
132834369 (spg11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132834369 (spg11)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
132834369 (spg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Salp15
MSV199
Motif
Other DBs
NCBI-GeneID:
132834369
NCBI-ProteinID:
XP_060709188
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All DBs
Position
39:complement(4137319..4270398)
Genome browser
AA seq
2440 aa
AA seq
DB search
MAGGPKVLEVLLDATLEWSEAKTLVKAKAVRCGQALCGLEPPSDRGAGLCFTARCQDSGR
CCRRRVAAQAGSFTEFIWETTETLQASPVKERLLALNSHNDLGIYELCVQDGICDVTNTH
SCSEEALKKLVESKNLSLPSSFTVKILSFKNSKSCMLLNNCTLLHLTWMESTSEADVLGC
FKLHLPGGAAERITDSPICQEMLFLLDSAGWIYIYDTVDGKQRGSVNLALCQAGETEEAN
DVCDLSCLDRLWLSHDLHIAVAVNSVNSAVCVNLNNFFRKHPENLEHTRKASADAPLKAP
VGVDEDDLASSVYSSKQLNLSFQMDRSWKARLGTFYSETKVSSAERFLQWSPWYHHLSSQ
NSHDATCNVNSYKSSLVPCDDVAKSFAHEEDVNNKANKLRWMVQLQGLEESMRIQTVSLS
EFSVLFTLVAPDSGAVTVAFWDLETQQVDYHHIKGQSLPVEGDGNDELSLFLTDTGLSMV
VFAFSQEDLLNRLMIYGKAGIVDSLCHLNHWNRCSIPIHALEAGIENRQLDTVDFFLKSK
EKLFCAPATLSAQEPSGAAIMSSVQLTNVEEIKPALDLLCSAIRVNYSETQGKQFSEQLL
NLTLTFLNKQMQELLTQSGELDKYKQKCVDYLTSYIIKLRKFMKKYPRTPPNETVTSDCL
GEENILPDGNHVYGKWKNLNTNEIVRDAILSNQIPRAQSYFTVQQTSMKDLNKLMQAGLN
LTYKSLLKKDLQEARQLLKNMGFDVKRQLHRICCYTADRDLRDFLVENLQDCLSEEEKEW
VKFVHFVESLYSSAQIMECPLQNSVLQAENIDPSFAAVLEPIINSDVGDTEHAERDSNCC
VVILDWAKWWDKVAKEQIKLCRELDVDLLAAIQFCSPEVLWTSLTSRHCWAKVRDWIEMF
QSSENSANWPPLSPDIVNQSTHCSNYMRNEILDILARKGVFIPSELANFRQFLVRLSCAG
GVMQKSHPVPVYQSPDGLDFYSCFILFCLEHELRYLLYAYLDYYGLKPSNCPLLDDTALH
VAHPWFEFLVRMREVADKLDTSVTFRASLANAQMLIPSNQASVSSMLLEGHTLMALATIM
FAPGGIDQVMQERKDVSDSLWKVDSQLLKMALSPYPKLRTALFPQLTPYGIPPLDISLYH
LLQSLHPFDPSRLFGWQSANVLSTCDLSNDLPHFSCPDLVNKYAITERLDFSYYLRHGRP
SYAFATFVVQQLAKSSSPKQSIQQASIEAYTLGLAHFTVPAVAAACVAFLELLGVSSFKL
RIDLKVADAILKLWCTNAEETQRSLLRDTLAEKLQNLIEFNGSAAEELLTHLENATWENL
KTRDISRTSFEAGQEWSLVAQFCKLHGITVSLAYLQECAREDAWLQFVIFAQLHNYQPNE
VKALLKDFSPALQDHLTLAFQNLQFVAQEKPVICSVTKEETNKRDESPVDLFQVLYWCQE
KAKPWRYLLSEAVRHSAPVLSVLAACFQETDVLQCLCVWIIMTSDDAIVSEVTKHINDSI
EYHEWNLHDLSLMWKVLLERRKSKQLVRGFQLFQKHCPWVYMLEMYELCTEHKNYQESKL
RLQEFQKCLLTLKAEDSASTDIPVQWMESQADLLLKLMIQQCPTQYELGKLLQILADVDC
GLKISEDFGLDFRKLSRLSQLLQDTSISIDPSLLVDCSTGTLQNVCGQILDQLQKKGLFA
LARQVADLAQLPVDHLVVHEVTQELQNLKQSGQWQRKETRINFWKKCHDCFKNYLISNVV
ASEFFLAQVNEMPVIKSLLPSSFKDQSLNIQERCLLLTMAGHWLSQSNPPNLDQLEELEK
RIWLCRISQQTLLMSTNSRFAWQLSVCGEITFDGATKEFLFSKLPALNSPKYLRLEGFPN
KDMASNCALDAAERDALNILIGELLDGGCVHEASRVCGYFEFYNQDTSLVLHCRAMASGE
LQTVDFHPSVQIILTAGASFNGEIGFHRKRIPSLSSVTSSFGQCSEEDSVKDQVVKDLQI
LTNECYHGKGYCRQVLSLYQLSKELGCSFNDISTQDSDTVLREVLSSQQPDRYKKAQAFI
STQELKPETVAALIAEEVVQASLSSVEAKGVRQIYKHLDGKEAFLQLAKLCQDPILVGTK
LLDKISSIPNGELECTVELLILAHDCFSLTCHMEGISRVLQAARHLSHKHLAPKEAYSLM
VRLVTGIGRYNDMTYIFDLLHENHRFEMLLRKNVESNGDLKTALLDYIKRCLPGDSEKHN
MVAFCFSMCREIGENHEGAARVQLKIIESQSWEVTPELKKSLVKVLNFLKDAAESYSKDS
CIRRASQCVKLAKLVTLQLHLLNNNRDVQLINLQRNDLMPCILSLPRFYQAAIVAEAYDF
VPDWAEVLYEQVIVRGEFSYLEEFKQQNHVQQSLFEEISNKFKRHKGDVAASQNMKKLLQ
HCENVYLVYKLAYEHNFTDVANKLLKEPQTSCYLNDMIAS
NT seq
7323 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcggcccgaaggttctcgaagtcttactggacgccacgctggaatggagcgag
gccaagaccctggtgaaggccaaggccgtgcgctgcggtcaggcgctgtgcggcctggag
ccgccctcagaccgaggggccggcctgtgcttcaccgcacgctgccaggattcgggccgc
tgctgccggaggagagtggctgctcaggccgggagcttcaccgagtttatttgggaaaca
actgagactttacaggcgtcacctgttaaggagcggcttcttgctctcaatagtcacaat
gatttggggatctatgaactgtgtgtccaggatggcatctgtgacgtcaccaatacccac
agctgtagtgaggaagcactgaagaagctggttgaaagcaagaacttgagtctgccttca
tcttttactgtgaagattctgtcatttaaaaacagtaaatcctgcatgttgctcaataat
tgcacactgctccatctgacctggatggagagcacctcggaagcagatgtgttgggctgc
tttaaactgcatctgcccggtggtgctgcagaaagaataacagatagtccgatttgtcaa
gaaatgcttttcttattggacagtgcaggctggatatatatctatgatactgttgatggt
aaacagcgtggcagtgttaatcttgctctgtgccaggctggagaaactgaagaggcaaat
gatgtctgtgatctgtcatgcttggacagactctggttatcccatgatttgcacattgct
gtggctgtgaactctgttaatagcgctgtttgtgttaacttgaataattttttcagaaaa
caccctgagaacttggagcatacaagaaaagcttccgctgatgcacctttgaaggcacct
gttggtgttgatgaagatgaccttgccagttcagtatatagcagtaaacagctcaaccta
tcatttcagatggataggtcctggaaagcccgcttgggaactttctacagtgaaactaaa
gtatcatcggcagaaagattcctgcagtggtctccctggtatcaccacctgtccagccaa
aattctcatgatgcaacctgcaatgtcaattcctataaatcctctctagtgccttgcgat
gatgttgccaaaagctttgctcatgaagaggacgtgaacaacaaagccaataagttgaga
tggatggtgcagcttcaggggctggaggaatccatgcgtattcagacagtatctctttct
gaattcagtgttttattcacacttgttgcacctgactcaggagctgtgactgttgccttc
tgggacttggaaacacaacaggtggattatcatcatattaaaggtcaatccttaccagtg
gaaggagatgggaacgatgaattatccctgtttctcacagatactggcctttccatggtg
gtgtttgctttctcacaagaagatctattgaatcgtttaatgatttatgggaaggcaggc
attgtcgactcattgtgccatctcaatcactggaatcgatgttcaattcccatccatgca
ttagaggcaggaattgagaacaggcagctagatacggttgattttttcctgaagagcaaa
gaaaagttattttgtgctccagcaacactttcggcacaggaaccttctggagctgcgata
atgtcttcggtgcagctaacaaatgtcgaagaaattaagccagctttagatttgctatgt
tcagccatcagggtaaattattctgaaacgcagggcaagcagttctctgaacagcttctg
aaccttacattgacttttctcaacaaacaaatgcaagagcttctaacccagtcaggagaa
ttggacaagtacaagcaaaaatgtgtggattatttgaccagttatattatcaagctccgt
aaatttatgaagaaatatcctcgaacacctccaaatgagactgtaactagtgactgtctg
ggtgaagaaaacattttaccagatggtaatcatgtttatggaaagtggaagaatctaaat
actaatgaaattgttcgtgatgctatactcagtaatcagattccacgagctcagagctat
ttcacagtacaacagacatctatgaaagatctgaacaaactcatgcaagctggtttaaat
ctaacctacaaatctcttttaaaaaaagacctgcaggaggctaggcaacttttaaaaaat
atgggttttgatgtgaagagacaactgcatcgtatctgttgctacacagctgatcgagac
cttcgtgatttcctggtggaaaatctccaggactgtttatctgaggaagagaaggagtgg
gttaaatttgttcactttgtagagagcctatattcctctgcgcaaatcatggaatgtcct
ttacagaacagtgttttgcaggctgaaaatattgatcccagttttgcagctgtcctggaa
cctattataaactctgatgttggggatactgaacatgcagaaagagattcaaactgttgt
gtagtcattttggattgggccaaatggtgggataaggtggcaaaagaacaaataaagtta
tgtagagaattggatgtggatctcctcgcagcaattcagttttgtagtcctgaggtattg
tggaccagcctcacatccaggcattgttgggccaaagttcgtgactggattgaaatgttc
caaagtagtgagaattctgcaaattggccacccctgtcacctgatattgtgaatcagagc
acacattgcagtaactacatgagaaatgagatattggacatattggcaagaaaaggagta
ttcatcccttcagagctagccaactttcgacagttcctggtcagactaagctgcgcaggg
ggagtgatgcagaaatctcacccagttcctgtttaccagtctcctgatgggcttgacttc
tacagctgtttcatcctcttctgccttgagcatgagctacgctatcttttgtacgcttat
ctggattattacgggttgaaaccctccaactgtcctcttctggatgatacagcactccat
gtggctcatccctggtttgagtttctagtgagaatgagagaggttgctgataagctagat
acatctgtgacattccgagcgagtctagccaatgctcaaatgctgattcccagcaatcaa
gccagtgtcagcagcatgctgctggagggacacactctaatggcattagccactatcatg
tttgctcctggaggaattgatcaggtgatgcaggagagaaaagatgtaagtgattctctc
tggaaagtagactctcagctgttgaagatggcactgtctccttatcccaagttgcgcact
gctctttttccacagctcaccccttatggcattccaccattggacatctctctctatcat
cttttacagtcattacacccctttgatccatcacgcctctttggctggcagtctgccaat
gtgctctccacttgtgacttatcaaatgatttacctcatttctcttgccctgacttggtg
aataagtatgccataactgaacgcctagatttttcctactacttgcgtcatggccggcca
tcgtacgcatttgcaacttttgtggtgcagcagcttgcaaagagcagttcacccaaacag
tcgatccaacaagcaagcattgaggcatacactctggggttagctcacttcactgtacct
gctgttgctgctgcctgtgtcgcctttcttgaattacttggtgtttccagttttaaactc
cggattgatcttaaagttgcagatgccattttgaaactttggtgtacaaatgcagaagaa
actcaacgcagtttattacgagacaccttggctgaaaaacttcagaacttgattgaattt
aatggatcagcagcagaggagttgctgacccatttagaaaatgccacttgggagaactta
aaaaccagagatataagcaggacatcttttgaagccggtcaagagtggtcactggtagca
caattctgtaagcttcacggcattactgtcagcttggcttatctccaggagtgtgcccga
gaggatgcgtggctgcagtttgtgatttttgctcagcttcacaactaccaacccaatgag
gtgaaggcactattgaaagacttcagtcccgctcttcaagatcacctgacactagctttt
cagaacttgcagtttgttgcacaagaaaagccagtaatttgttctgtaaccaaggaagaa
accaacaagagagatgaatctccagtggatctttttcaagttctgtattggtgccaggag
aaggcaaaaccttggcgttatctgttgagtgaggcggtgcggcacagtgcccccgtgttg
agtgttttggctgcatgttttcaggaaactgatgttcttcagtgtctttgtgtttggatt
attatgacatcagatgatgcaattgtctctgaagtgacaaaacatattaatgattcaata
gaatatcatgaatggaatctccatgatctttcgctgatgtggaaagtgttactggaaaga
agaaaaagtaaacaacttgttcgaggatttcagctttttcagaagcactgtccgtgggtc
tacatgttagagatgtatgaattgtgcacagaacacaagaattatcaagaatcaaagttg
agacttcaggaattccagaaatgcttactgactttgaaggcagaagattcagcaagtact
gacatcccagtccaatggatggaatcacaagctgatttacttctgaagttgatgatacaa
cagtgtccaacacagtatgaacttggaaagctactgcagatactggctgatgtggactgt
ggcctgaaaataagtgaagattttgggctagatttccgaaaactgagcagactcagtcag
ctcctgcaagacacctcgatctctattgatccttccctccttgttgactgcagcacaggc
actttgcagaacgtatgtggacaaattctggaccaactgcagaagaagggactttttgct
ttagctagacaggtggctgacctagcccagcttccggttgatcacttagtggtccatgag
gtaactcaggagcttcaaaatttgaagcaatctggtcaatggcaaaggaaggagaccagg
ataaatttttggaagaaatgccatgattgtttcaaaaattatttgatatccaatgtagtt
gcttctgaattctttctggcccaggtcaatgagatgccagtaattaaatctctactgcct
tcatctttcaaagaccagtccctgaacattcaggaaagatgtctcctgttgacaatggca
ggccattggctgtcacagagtaatcctccaaacctggatcaattggaagaattggagaag
agaatttggctgtgtcgcataagtcagcagaccttgctaatgtccacaaattcaagattt
gcctggcagctgtcagtgtgtggtgaaataacttttgatggtgccaccaaagaattctta
ttctcaaaactgcctgctctcaactctccaaagtatctcaggctcgaagggtttcccaac
aaggacatggcttccaattgtgcactggacgcagcagaaagagacgctcttaatattttg
attggcgagttgttagatggaggctgtgttcatgaagccagtagagtttgtgggtatttt
gaattttacaaccaagacacatctttagttctccactgcagagccatggcttcaggagaa
ctgcaaacagtagattttcacccttcagtgcagattatcttgactgcaggagcatctttt
aacggtgagataggcttccatcgaaaaagaattccaagtttgagcagtgtaacctcatca
tttggtcagtgttctgaagaagacagtgttaaagaccaggtcgttaaggatcttcaaatc
ctcacaaatgagtgctaccatggaaaaggttattgtcgtcaggttcttagcttgtatcaa
ctctcaaaggagcttggttgttctttcaatgatatatcaacccaagattctgatactgtt
ctgcgagaagtattgtcatctcaacagcccgatcgatataaaaaagcccaggcgtttatc
tcaacccaagaactgaagccagaaactgtagcagcacttatagctgaagaagttgttcag
gcttcactctcttcagtagaagccaaaggagtgaggcagatctataagcaccttgatggg
aaagaggctttcctacagctcgctaaactgtgtcaagatccgatcctcgttggtaccaag
ctgttggataaaatttcatccattccaaatggggaactggaatgcactgtggagctgctg
attctagcacatgactgctttagcctgacctgtcacatggaggggattagtcgcgtgttg
caagctgcacgccacctcagtcataaacacctcgcacccaaagaagcatacagcctcatg
gtccggctggtgactggcattggtcgatacaatgacatgacgtatatatttgacctgcta
catgagaatcatcggtttgaaatgctactgaggaaaaatgttgaatcaaatggagacctg
aagacagctttgctagattacatcaaacgttgtctccctggggatagtgaaaagcacaac
atggtggctttttgcttcagtatgtgtcgtgagattggggaaaaccatgagggtgcagcc
cgtgtacaacttaaaatcatcgagtcacaatcctgggaggtgactcctgaattgaagaaa
tctctggtgaaagtcttgaactttttgaaagatgctgctgagagctactcaaaggactcg
tgtatccgacgtgcctctcagtgtgtgaaacttgccaaactggtcactctgcagctccat
ctcctaaacaacaatcgggacgtgcaattaattaacctccagagaaatgatctgatgcca
tgtattctctccttgccgaggttctatcaggctgccattgttgcagaggcatatgacttt
gtacctgattgggcagaggtgctatatgaacaggttattgttcgtggtgaattttcctac
ctagaggagtttaagcaacaaaaccatgtacaacagagtctgtttgaagagatttcgaac
aaatttaaacgacacaagggagatgttgctgcaagtcagaacatgaagaaattgctgcag
cactgtgagaatgtctacctggtttacaaactggcttatgagcataactttactgatgta
gcaaacaagctccttaaagaacctcagacaagttgctatctgaatgacatgattgccagt
tag
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integrated database retrieval system
