KEGG   Hemiscyllium ocellatum (epaulette shark): 132834491
Entry
132834491         CDS       T09720                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03082  ATP-dependent chromatin remodeling
hoc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    132834491
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    132834491
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hoc01009]
    132834491
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hoc03021]
    132834491
   03036 Chromosome and associated proteins [BR:hoc03036]
    132834491
Protein phosphatases and associated proteins [BR:hoc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     132834491
Transcription machinery [BR:hoc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     132834491
    SWI/SNF complex
     132834491
Chromosome and associated proteins [BR:hoc03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    132834491
   PBAF complex
    132834491
   SWI/SNF complex
    132834491
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 132834491
NCBI-ProteinID: XP_060709391
LinkDB
Position
40:22905421..22936844
AA seq 396 aa
MAASKTFGLKPVKFQLEQASEWFMIGSEVGNYLRMFRGSLYKKYPSLWRRLATVEERKKI
VASSHDHGYTTLATNVTLLRATEVEEILEGNDEKYKAVSISTEPPTYLREPKSKRSNQWV
PTLPNSSHHLDAVPCSTSINRNRMGRDKKRVFPLCFDDHDPAVIHENAAQPELLVPIRLD
MEIDGQKLRDTFTWNMNEKLISPEMFAEILCDDLDLNPLNFVPAVASAIRQQVESYPMDS
ILEDQTDQRVIIKLNTHVGNILLVDQFEWDMSERDNSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPIVESALRNTTDADQWCPLLETLTDAEMEKKIRDQDRNT
RYSTTTWSPRNTRMRNRSRPFGPSSYVCHSIKPWLI
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggcggccagtaaaacatttggattgaaacctgtgaaattccagctggaacaagcaagc
gagtggttcatgattggatcggaggtgggaaattacctgcgcatgttccggggctcgctg
tacaagaagtatccatccctctggagacgcctggccactgtcgaagagaggaagaagatt
gttgcttcgtcacacgatcatggctacaccactctggccacaaacgttaccctgcttcgt
gcaacggaggtggaagagattctggaaggcaacgatgagaagtataaggctgtctccatc
agcactgagcctccgacgtacctccgggaaccaaagtcaaagagaagtaaccaatgggtt
cccaccctacccaacagttcacaccacttggacgcagtgccctgttcaacctctatcaac
agaaaccgcatgggacgggacaagaagagggtgttccccctatgttttgatgaccacgat
cccgcggttatccatgagaacgccgcccagcctgagctcctagtgccgatccggttggac
atggaaatcgatgggcagaagctgcgggacaccttcacctggaacatgaatgagaagctg
atatcgccagagatgtttgctgagatcctctgcgacgacctggacttgaacccgctgaac
tttgtgccggctgtggcctcggccattcggcagcaggtggaatcctaccccatggacagc
attctggaggaccagactgaccagcgcgtcatcatcaagctcaacacgcacgttgggaat
atcctgctggtggaccagtttgaatgggacatgtctgagagggataattcgcctgagaag
tttgcgttgaagctgtgctcggagttgggcctgggcggggaattcgtcacgaccatcgcc
tacagcatccgtggacagctgagctggcaccagagaacgtacgcgttcagcgagaatccg
ttgccgatcgtggagagcgccctccggaacaccacggatgccgaccagtggtgccccctc
ctggaaaccctgaccgatgccgagatggagaagaagattcgcgaccaggacagaaacacc
aggtacagcacgaccacctggagtccgaggaacaccagaatgcggaacaggagtcggccg
ttcggcccctcgagctatgtctgccattcaataaaaccgtggctgatctga

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