Hemiscyllium ocellatum (epaulette shark): 132834797
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Entry
132834797 CDS
T09720
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hoc03036
]
132834797 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hoc03037
]
132834797 (bbs4)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
132834797 (bbs4)
Cilium and associated proteins [BR:
hoc03037
]
Primary cilia and associated proteins
BBSome
132834797 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_19
TPR_11
TPR_16
TPR_12
TPR_14
TPR_17
TPR_CcmH_CycH
ANAPC3
TPR_9
ARM_TT21_4th
ARM_TT21_2nd
TPR_15
Wzy_C_2
NatA_aux_su
PknG_TPR
ARM_TT21_N
TPR_20
ARM_TT21_C
Coatomer_E
ChAPs
HrpB1_HrpK
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
132834797
NCBI-ProteinID:
XP_060709819
LinkDB
All DBs
Position
42:35672209..35719777
Genome browser
AA seq
554 aa
AA seq
DB search
MSDLGKELVVQCTDVRKSQSRKVPELPIFERRNWLIHLHYIRKDYETCKTIIKEQLHETH
GMCEYAVYVQALIFRLEGKIQESLELFQTCAILNPQNVDNLKQVARSLFLLGKHKAAIEV
YSEAAKLNEKDWEISHNLGVCFLHLKNFEKAKEYLNCALQTSRHDLTFMVLGKLHLMEGN
TQNAIETYKKAVEFSPENAELLTTLGLLYLQLGMYQKAFEHLGNALTYNPNNYKAILAAG
SMMQTHGDFDVALSKYRVAAHAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFD
WKILYNLGLVHLTMQQYASAFHFLSAAINMKPRMGELYMLLAVTLTNLADPDNAKRAYNQ
AVSLDQSNPLVNLNYSILLYNQGDKKGALHQYQEMEKKINKLKASSNMPEFDPELVDMAQ
KMGAALQVGENLVWTKPAKDSKSRERPAPSSKSTTNQQPLGSNQALGQAMSSAAGYSKTM
QLSAGGCPIRTQKPPSLPLEPESTVDAGTDDLNKKRELRLLHAHHLLQIVLSPEQVLQIQ
NESLKWNSLLSNGL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttggggaaagaattggtcgttcaatgtactgatgttcgaaaatcacaatca
aggaaagtaccagaactccccatctttgaaagacggaactggctgatacatttgcattat
atcagaaaggactatgaaacctgtaagacaataatcaaagaacagctgcacgagacccat
gggatgtgtgaatatgccgtgtatgtacaagctttgatattccgtttggaaggaaaaatt
caagagtctcttgagctctttcagacttgtgcaatactaaatcctcagaatgtggacaac
ctgaaacaggtggctcgatcgctgtttctgcttgggaaacacaaagcagcaattgaagtt
tacagtgaagctgcaaaattaaacgaaaaggattgggagatcagccacaatctcggtgtc
tgcttcttgcatttgaagaactttgagaaggctaaagaatatctgaactgtgctttacaa
accagccgtcatgatctgactttcatggtcctcgggaagctacacttaatggagggaaat
acccaaaatgcaattgaaacatataagaaagcagtggagttttctcccgaaaatgccgag
cttctgactacattggggttgctgtacctgcagcttggaatgtatcagaaagcctttgaa
catctaggaaatgcacttacctacaaccccaataattacaaggccatcctggctgcaggc
agtatgatgcagactcacggtgactttgatgttgctctgagtaagtacagagtagcagca
catgctgtcccagaaagtccacccctgtggaacaacattggaatgtgtttctttggcaag
aagaaatatgtagcagctatcagctgtttgaagcgagccaactacctggctccctttgat
tggaagattctctataatctgggcttggtgcacttgacaatgcagcaatatgcgtcagca
ttccacttcctgagtgctgccatcaacatgaagccgagaatgggcgagttatacatgctg
ctggctgtgacattaaccaacctggcagatcctgacaatgcaaagagagcctacaaccaa
gctgtgagtttggatcagtcaaacccactggtgaacttaaactattcaattttactgtac
aatcaaggtgacaaaaagggagcccttcaccaatatcaggaaatggagaagaagatcaat
aaactgaaagccagtagtaacatgccagagtttgatccagagctggtagacatggctcag
aagatgggagctgctcttcaggtcggggagaatctggtctggactaaaccagcaaaggat
tccaaatcaagagagcgtccagcaccatccagtaaatccaccaccaaccaacaaccgctg
ggctctaaccaggccctaggtcaggctatgtcatcagctgcagggtatagcaaaacaatg
cagctctctgcaggtggatgcccaatccgaacacagaaacctccatcattacccttggaa
ccagagtccactgtagatgcgggcactgatgacctgaacaaaaagcgagaactgagacta
ttacatgctcatcatctattacaaattgtgttatcacctgaacaggtattgcaaatacaa
aatgaatctttaaaatggaacagccttctgagcaatggattataa
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integrated database retrieval system
