Hemiscyllium ocellatum (epaulette shark): 132834804
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Entry
132834804 CDS
T09720
Name
(RefSeq) syndecan-1-like
KO
K06257
syndecan 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04512
ECM-receptor interaction
hoc04514
Cell adhesion molecule (CAM) interaction
hoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132834804
04514 Cell adhesion molecule (CAM) interaction
132834804
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132834804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132834804
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hoc04090
]
132834804
00535 Proteoglycans [BR:
hoc00535
]
132834804
Membrane trafficking [BR:
hoc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
132834804
CD molecules [BR:
hoc04090
]
Proteins
132834804
Proteoglycans [BR:
hoc00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
132834804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
BenE
DUF2613
Motif
Other DBs
NCBI-GeneID:
132834804
NCBI-ProteinID:
XP_060709834
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Position
3:138668183..138719669
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AA seq
335 aa
AA seq
DB search
MKTPSFSLKFLLAMGLPFALLAMSSTKVPESLGDYEIDGSGIESEDDDIYSGSGSGDGFM
LRNFDVEHTTTFRTLPSTTSSNFHSSSQVAMTSDMITEADVNILLVHHDLPVVDTTIGAT
VTSSKSATFIPQGTDIHLVPENNTKSFLARGVGSKHDVTEVSSAKPTVYATLPENAVTVV
DDESLAVTKMFAANEMTTMVGQNSEQSEKEVKNEIFDDLQLNNAITESDIYFTDIIESRT
VLNQNHILDTKTSIEPPQERYSHEASASGSFLERRELLAATVASGFVGLVLAVLLVAVLV
YRMKKKDEGSYTLDESKQLPNGGYQKPQKQEEFYA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgccaagtttcagtctgaagtttcttttggcgatgggattgccttttgccctt
ttggcaatgtcttcaacaaaggtgccagaaagcctaggtgactatgaaatagatggatct
ggcatcgagtctgaagatgatgacatctattctggctctggctctggtgatggctttatg
ctaagaaattttgatgtggagcatacaacgacttttcgcacacttccttcaacaacttca
agtaatttccattcatcaagccaagtagccatgacaagtgatatgatcacagaagcagat
gtgaatattttactggtgcatcatgacttaccagtagttgatacaactattggagccaca
gtgacgagtagtaaatctgcaacttttattccacaaggcactgatattcatcttgttcct
gaaaacaacactaaaagttttctggcacgtggagttggatccaaacatgatgttactgaa
gtgagcagtgccaagcctactgtttatgccacattaccagagaatgcagttactgttgtc
gatgatgaatccttagctgtcacaaagatgtttgcagcaaatgaaatgacaaccatggtg
ggtcaaaattctgaacaatctgaaaaggaagtgaagaacgagatatttgatgatttacaa
ctgaacaatgcaatcactgagagtgatatatacttcacagatataatagaaagtagaact
gttctgaatcaaaaccacattctagatacaaaaacatctattgagccaccgcaggagaga
tactctcatgaagccagtgcatctgggagctttctggaacgaagggaattgttggcagca
actgttgcttcaggatttgtgggacttgtacttgctgttctacttgttgcggtgctcgtg
tatcgaatgaagaaaaaggatgaaggaagttatacgttggatgaatccaagcaactacca
aatggaggctaccagaaaccacaaaagcaagaggagttctatgcataa
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integrated database retrieval system
