Hemiscyllium ocellatum (epaulette shark): 132834860
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Entry
132834860 CDS
T09720
Name
(RefSeq) nuclear receptor ROR-alpha A
KO
K08532
RAR-related orphan receptor alpha
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoc03000
]
132834860
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hoc03310
]
132834860
Transcription factors [BR:
hoc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132834860
Nuclear receptors [BR:
hoc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
132834860
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
132834860
NCBI-ProteinID:
XP_060709939
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Position
42:complement(17531332..17725876)
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AA seq
465 aa
AA seq
DB search
MMYILCSAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNC
LIDRTSRNRCQHCRLQKCLTVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQ
PGEAEPLTPTYNGLTELNNDLSNLYMDGHTPEVGKADSGMNNFYLDIQPSPDQSGLDING
IKQEPICEYAAVPDFFPYCSFTNGESSPTVSMTELEHLAQNISKSHIETCQYLREELQQI
TWQAYVQEEVEIYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKA
GSLEVVFVRMCRAFDPQNNTVYFDGKYAGPDIFKSLGCDDLINSIFEFGKGLCMLHLVED
EIALFSAYVLISADRLWLQEKIKVEKLQQRIQLTLQHILQKHHREDGILTKLLSKVSTLR
TLCNRHIEKLSSFKAIHPDIVRVHFPPLYKELFSSEFEQMMPTDG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatattctgtgctcagccatgaaagctcaaattgaaattatcccatgcaagatc
tgtggagataaatcgtcaggaatccattatggcgtcattacctgtgaaggctgcaagggt
ttcttcaggagaagccaacagagcaatgctacctactcatgccctcgacaaaagaactgc
ctcatcgaccgaacaagccgcaatcgatgccagcactgccgattacagaagtgtttgaca
gtgggaatgtctcgagatgctgtcaagtttggtcggatgtccaagaagcagagagacagt
ctgtatgctgaggtccagaaacatcgtctgcagcaacaacagcgagaccaccagcagcaa
cctggggaagcagaacccctgactccaacgtacaatgggctgacagaactgaacaatgac
ctcagcaacctttacatggatgggcacactccagaagtgggcaaagctgactcaggaatg
aacaacttctatctggacattcagccatcccccgaccagtccggcctagacatcaatggt
attaaacaggagcccatatgtgaatatgcagcggtccctgacttttttccatactgctcc
ttcacaaacggtgaaagctctcccactgtctcaatgacagaactagagcacctcgcacag
aacatctccaagtcccacattgagacctgccagtacctgcgggaagagttgcaacaaata
acatggcaagcctatgtgcaggaagaagtggagatttaccagaataagccccgggaggtg
atgtggcagctttgcgctatcaaaataactgaagcgattcagtatgtggtggagtttgcg
aaacggatcgatggattcatggaactgtgtcaaaacgatcagattgtacttctgaaagca
ggttctttagaagttgtgtttgtccgaatgtgtcgagcctttgacccacagaataacacg
gtttattttgatggcaaatatgctggtccagatatcttcaaatcattaggttgtgacgac
ttgatcaactccatctttgaattcggtaaaggtttgtgtatgttgcacctcgtggaggac
gagatcgccttgttttctgcctacgtgctgatctctgcagatcgtctctggctccaggag
aagataaaagttgaaaaactgcaacagagaattcaattaacactccagcatattttgcag
aaacatcacagagaggatggcattctgacaaagctgttatctaaagtgtctacgttacga
acactgtgtaatcggcacattgagaagctgtcctcgttcaaagcaatacacccagacatt
gtgcgggtacatttccctccgttgtataaggagctgttcagctccgagtttgagcaaatg
atgccgacggatggttag
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