Hemiscyllium ocellatum (epaulette shark): 132834941
Help
Entry
132834941 CDS
T09720
Symbol
ldb3a
Name
(RefSeq) LIM domain-binding protein 3a
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132834941 (ldb3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hoc04990
]
132834941 (ldb3a)
Domain-containing proteins not elsewhere classified [BR:
hoc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
132834941 (ldb3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
132834941
NCBI-ProteinID:
XP_060710093
LinkDB
All DBs
Position
43:11407432..11583454
Genome browser
AA seq
728 aa
AA seq
DB search
MSTYNVSLNGPAPWGFRLQGGKDFNMPLTISRVSPGSKAAQANVNQGDTIVAIDGVSTEG
MTHLDCQNKIKSATYSLNLSLQKSRRPGPVPTAALRMDSPMPVIPHQKIVNTTSNEYVEH
FNPNVLKDSVLSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQAHARGSDL
SSNLHVKDALVDSASPVYQAVVRNSNKPQQTHQQELDEWTRRAANLQSKSFRILAQMTGT
QYLQDPDEDAMKRSREKFEHEVKGPRFAKLRKWHHGLSAQILNIKGCTTVGLLVFRTPNP
TSFPLHSPNSCESTPIEHAQPASSASSPAYAAMPVASANTPAVANLMASPISPPTAAGQD
RTAVPASPALQSWQQTSSSSISHQSQSAHSIRTSQGFSSNTNVIRPPASQVCTDASNLAS
KPKVVSTASIKPATVHSTGEHMHSSTATFNVAKPAPAPPNEPTAMTSDGRPPWVTDDSFA
QKFQPGKSTTTLTKHIQPLPHSAPPKPFASSLPQTPAYVPTHAPVPGQTSGGTRNLVQRA
ERFPASSRTPLCGQCNSIIRGPFLVALGRSWHPEEFNCTYCKTSLVDTGFVEEQNNIYCE
RCYEQFFAPNCAKCNTKIMGEVMHALRQTWHTTCFVCAACGKSFGNSLFHMEDGEPYCEK
DYIALFSTKCHGCDFPVEAGDKFIEALGYTWHDTCFVCAVCHVNLEGQPFYSKKDKPLCK
KHAHAINV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacctataatgtgtctctcaatggccccgcaccttggggcttcaggctgcaggga
ggaaaggatttcaacatgcccctgactatatccagagtaagcccagggagtaaggcagcc
caagcaaacgtcaaccagggggataccatcgtggcgatagatggggtcagcacagagggt
atgactcacctggactgccagaataagatcaaatcagccacctactccctaaacctgagc
ctccagaagtcaagacgcccaggcccagttcccactgcagctcttcgtatggactctccc
atgccagttatccctcatcaaaagatcgtcaacactacatccaatgagtatgtggagcat
ttcaaccccaacgtcctgaaggattccgtgttgtccacacacaagccaatcgaagtgaaa
ggccctggtgggaaggccaccatcatccatgcccagtataacacacccatcagcatgtac
tcccaagatgccatcatggatgccattgctggtcaggctcatgccagaggcagtgatctt
tcaagtaacctacatgttaaagatgctctagtcgacagtgcctctccagtctaccaggct
gttgttcgtaactctaacaagccccaacaaactcaccagcaggagctggatgaatggact
cgccgggctgccaatttgcagtccaaatcttttcgtatccttgctcagatgactggaaca
caatacttgcaagatccagatgaggatgcgatgaaaagatcaagggaaaagtttgaacat
gaagtaaaaggtccacgctttgccaaattgcgcaaatggcatcatggtctgtctgcacag
atccttaatattaaaggttgtacaactgttggcctcttggtattccgtactcctaatcca
acctcgttcccattacatagtccaaattcttgtgaaagcacacctattgagcacgctcag
ccagcttcgtcagcatccagccctgcctatgctgctatgcctgttgcttcagccaatacg
cctgctgtcgctaacctgatggcatcgccgatctcaccacctactgctgccggtcaagat
cgtactgctgtgccagcctcccctgctctgcaaagttggcagcagacgtcctcttcctct
atcagccaccaatctcaatcagcacatagcataaggactagtcagggtttctcaagcaac
accaatgtgatcagacctccagcatctcaagtctgtacagatgcctcaaacctagcttct
aaaccaaaggtggtcagcacagcgagtatcaaacctgcaaccgttcactcaactggagag
cacatgcacagcagcactgccacattcaatgttgctaagcctgctccagctcctccgaat
gaaccaactgctatgacatcagatggacgaccaccatgggtaacagatgatagcttcgcc
cagaaatttcagcctggaaaaagcaccaccaccctcaccaaacatattcagcctttgcca
cattctgcaccaccaaaaccatttgcgtcatccctgccccagacacctgcttatgttcct
acacatgctccagtgccagggcagaccagtggaggcactcgcaaccttgtgcaaagggct
gaaagattcccagcaagcagccgaactcctttatgtggacagtgtaacagtattatcaga
ggtcctttcctcgtggccttgggccgctcctggcaccctgaggaatttaactgtacttac
tgcaagacctcccttgtcgatactggatttgtagaggagcagaacaatatttactgtgaa
cggtgctatgagcagttctttgctccaaattgtgctaagtgtaatacaaagataatgggg
gaagtaatgcatgccctaagacaaacttggcacaccacctgctttgtctgtgctgcctgt
ggaaaatcttttgggaacagccttttccatatggaagatggagagccctactgtgagaaa
gattacattgctctcttcagcactaagtgccatggctgtgacttccctgtggaggctggt
gataaattcattgaagctttgggttatacctggcatgacacctgctttgtctgtgctgtg
tgccatgtaaatctagaaggtcagccattttattccaaaaaggacaagccactctgcaag
aagcacgctcatgccattaatgtttga
DBGET
integrated database retrieval system
